Pairwise Alignments

Query, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

Subject, 455 a.a., putative DNA repair protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  354 bits (908), Expect = e-102
 Identities = 189/427 (44%), Positives = 276/427 (64%), Gaps = 5/427 (1%)

Query: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAEE-APAEALPKGQTGGRGGQRLSFVS 59
           MAK    +VC  CG   P+W+G+C +CGEWN+  EE    E   +    G   Q+   V 
Sbjct: 1   MAKEKTVYVCSNCGQESPKWVGKCPSCGEWNTYVEEIVRKETTNRRPVSGIETQKAKPVI 60

Query: 60  LEGVGAPP-PRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVAGLARGGAR 118
           L  + A   PR+     EL+RV GGGLV GS +LIGG+PGIGKSTL++Q V  L     +
Sbjct: 61  LSEIEADDEPRINMHDDELNRVLGGGLVPGSLVLIGGEPGIGKSTLVMQTV--LRMPDKK 118

Query: 119 SVYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVVIDSIQTMY 178
            +Y+SGEE+  Q++LRA RL    +   +   TS+  I   + +  P D+V+IDSIQT+ 
Sbjct: 119 ILYVSGEESARQLKLRADRLSEVSSDCLIVCETSLEQIYVHIKNTSP-DLVIIDSIQTIS 177

Query: 179 LDTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEHMVDAVIYF 238
            + ++S+PG++AQVR  S  ++R AK     + L+GH+ KEG +AGP+V+EH+VD V+ F
Sbjct: 178 TENIESSPGSIAQVRECSASILRFAKETHTPVLLIGHINKEGSIAGPKVLEHIVDTVLQF 237

Query: 239 EGERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNVTGSCVFAG 298
           EG++ + +RILR++KNRFG+T E+G++EM   GL +V NPS L L++    ++G  + + 
Sbjct: 238 EGDQHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELLLSQDHEGMSGVAIASA 297

Query: 299 MEGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGGNDVYLNVA 358
           +EG RP L+E QALV  +  G+ +R+  G+D  R+ M++AVLE R G  L   DV+LN+A
Sbjct: 298 IEGVRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLEKRVGFKLAQKDVFLNIA 357

Query: 359 GGLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTRLKEAAKLG 418
           GGL++ +PA DLAV +A++SS     V P++ + GEIGLSGEIR V   + R+ EA KLG
Sbjct: 358 GGLKVNDPAIDLAVISAILSSNMDAAVEPEVCMAGEIGLSGEIRPVNRIEQRIGEAEKLG 417

Query: 419 FDQALMP 425
           F + L+P
Sbjct: 418 FKRFLLP 424