Pairwise Alignments

Query, 599 a.a., TPR repeat (NCBI) from Rhodospirillum rubrum S1H

Subject, 715 a.a., hypothetical protein from Azospirillum brasilense Sp245

 Score = 62.8 bits (151), Expect = 5e-14
 Identities = 67/206 (32%), Positives = 90/206 (43%), Gaps = 13/206 (6%)

Query: 394 GDLLRQDQRFAEAATAYSAAIARMGAPDPRHWAVYFGRGVAYERTDRWPLAEQDFQTALR 453
           G  L+   R AEA TAY  A+       P     +    VA E   R   AE  ++ AL 
Sbjct: 6   GVALQDQGRPAEAETAYRDALRDR----PEDAGTWKNLAVALEALGRTGEAETAYREALS 61

Query: 454 LNPDQPFVLNYLGYSWLDNGINVDQAKQLIERAVAQRPKD--GYIIDSLGWAHFRLGEYA 511
            NP+    LN LG   L  G   D+A ++  R  A  P D  G+++  LG A    G   
Sbjct: 62  RNPEHGVSLNNLGVLVLAAGRR-DEAGRIGRRMAALNPADRNGWML--LGTAAHAAGHRD 118

Query: 512 EAVGILERAIHETPDDATINDHLGDAYWMVGRRLEARYQWERALSLADDADLSASIQKKL 571
           EAV     A+   PDDA +  +L +A    GRR EA  ++   L L  D   + S+  +L
Sbjct: 119 EAVRANAVAVRLAPDDAVLRHNLANALAAAGRRQEAVAEYRTVLGLRPDVPAAVSLAAEL 178

Query: 572 DTGLS--PPSPVVPRSA-GRPAERQP 594
             GL   P +  V R A GR  +  P
Sbjct: 179 -LGLHDLPGAQAVLRGALGRHPDHGP 203



 Score = 34.3 bits (77), Expect = 2e-05
 Identities = 58/199 (29%), Positives = 75/199 (37%), Gaps = 35/199 (17%)

Query: 145 NGQNRQGLNSFLVPVALAWARAGAGDAGGAMTALDELSKNAGYATLRALHGALLQEQLGN 204
           N ++   LN+  V V  A  R  AG  G  M AL+   +N       A H A      G+
Sbjct: 63  NPEHGVSLNNLGVLVLAAGRRDEAGRIGRRMAALNPADRNGWMLLGTAAHAA------GH 116

Query: 205 KAKAGELYEAYVKGGERPSLRGVQLAGGFFVRTGQAARARALAADYSQRFPDSLLLDNAV 264
           + +A            R +   V+LA    V     A A A A     R  +++     V
Sbjct: 117 RDEA-----------VRANAVAVRLAPDDAVLRHNLANALAAAG----RRQEAVAEYRTV 161

Query: 265 AGFAEGGTPPAPEVGTAKDGMAELYYGTASLLADNDLQTATMFNRLALHLRPDFPLAQLL 324
            G         P+V  A    AEL       L  +DL  A    R AL   PD   A  +
Sbjct: 162 LGLR-------PDVPAAVSLAAEL-------LGLHDLPGAQAVLRGALGRHPDHGPAWRI 207

Query: 325 LGQLLAGQNRHDDAIAAYR 343
           LGQ LAG  R D A+ A R
Sbjct: 208 LGQTLAGALRPDAALHALR 226



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 17/162 (10%)

Query: 195 GALLQEQLGNKAKAGELYEAYVKGGERPSLRG----VQLAGGFFVRTGQAARARALAADY 250
           G  LQ+Q G  A+A   Y   ++  +RP   G    + +A     RTG+A  A   A   
Sbjct: 6   GVALQDQ-GRPAEAETAYRDALR--DRPEDAGTWKNLAVALEALGRTGEAETAYREAL-- 60

Query: 251 SQRFPDSLLLDN-AVAGFAEGGTPPAPEVG------TAKDGMAELYYGTASLLADNDLQT 303
           S+     + L+N  V   A G    A  +G         D    +  GTA+  A +    
Sbjct: 61  SRNPEHGVSLNNLGVLVLAAGRRDEAGRIGRRMAALNPADRNGWMLLGTAAHAAGHR-DE 119

Query: 304 ATMFNRLALHLRPDFPLAQLLLGQLLAGQNRHDDAIAAYRGI 345
           A   N +A+ L PD  + +  L   LA   R  +A+A YR +
Sbjct: 120 AVRANAVAVRLAPDDAVLRHNLANALAAAGRRQEAVAEYRTV 161



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 20/59 (33%), Positives = 28/59 (47%)

Query: 498 DSLGWAHFRLGEYAEAVGILERAIHETPDDATINDHLGDAYWMVGRRLEARYQWERALS 556
           ++LG A    G  AEA      A+ + P+DA    +L  A   +GR  EA   +  ALS
Sbjct: 3   NNLGVALQDQGRPAEAETAYRDALRDRPEDAGTWKNLAVALEALGRTGEAETAYREALS 61