Pairwise Alignments

Query, 599 a.a., TPR repeat (NCBI) from Rhodospirillum rubrum S1H

Subject, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 46.6 bits (109), Expect = 8e-10
 Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 3/138 (2%)

Query: 432 GVAYERTDRWPLAEQDFQTALRLNPDQPFVLNYLGYSWLDNGINVDQAKQLIERAVAQRP 491
           G AY   D     E  ++ A++LNPD    +++LG  +   G + ++A + + +A+   P
Sbjct: 35  GFAYIGIDNDKAIEY-YEKAIKLNPDDANAISFLGTLYDGEG-DREKAYEYLTKALEMEP 92

Query: 492 KDGYIIDSLGWAHFRLGEYAEAVGILERAIHETPDDATINDHLGDAYWMVGRRLEARYQW 551
           K+ ++  +LG  +    +   A+G  E+A+   P++      LG  Y+ +G    ++  +
Sbjct: 93  KNPWMYYNLGLYYLNHDDNM-AIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNF 151

Query: 552 ERALSLADDADLSASIQK 569
           E+A  +      S  I+K
Sbjct: 152 EKAYEINPKDQYSDMIEK 169



 Score = 35.4 bits (80), Expect = 2e-06
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 421 DPRHWAVYFGRGVAYERTDRWPLAEQDFQTALRLNPDQPFVLNYLGYSWLDNGINVDQAK 480
           +P++  +Y+  G+ Y   D   +A   F+ ALR++P+     + LGY++ D G +   +K
Sbjct: 91  EPKNPWMYYNLGLYYLNHDD-NMAIGCFEKALRIDPENECCWSQLGYTYYDIG-DYTNSK 148

Query: 481 QLIERAVAQRPKDGY 495
              E+A    PKD Y
Sbjct: 149 LNFEKAYEINPKDQY 163