Pairwise Alignments

Query, 334 a.a., Periplasmic binding protein/LacI transcriptional regulator (NCBI) from Rhodospirillum rubrum S1H

Subject, 324 a.a., galactose/glucose ABC transporter substrate-binding protein MglB from Vibrio cholerae E7946 ATCC 55056

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 79/305 (25%), Positives = 128/305 (41%), Gaps = 28/305 (9%)

Query: 1   MKKLLLTACAAAALLSASAAMAADAPKARIAVLMYGNKAEFVQLMERYGKEHPAVKAGIA 60
           M+KL + A  +A +   + A+A       I   +Y     F+ ++ R   E  A      
Sbjct: 1   MRKLTVLAMLSAGMGFGTQALA----DTTIGFTIYKYDDNFMSVV-RQAIEKEAAADSNT 55

Query: 61  EVTFYDGRYDAAVQNDQAQMAINTKQDAIVVNPMDYEANIDIATNAKMAGIPVVVTNAR- 119
            +   D +   ++QNDQ  + +     A+ +N +D  A   I   AK+  +PVV  N   
Sbjct: 56  RILMNDSQNSQSMQNDQVDVMLARGVQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEP 115

Query: 120 -------------LNTDEMTAEVVSDDVLGGYLEAKDVLTKLGCKGNVVIIEGPKGGSGE 166
                        + TD   + ++  D++    +A     K G    V+     KG  G 
Sbjct: 116 SAEAMASYDKAFYVGTDSKESGIIQGDLISAQWKANPAWDKNG--DGVLQYVMLKGEPGH 173

Query: 167 IQRGQGNEKALAECPAGAVKV--LERKTANWSRAEALDLMQNWLSKHPG-KINGVIGQND 223
                    ++       +K   L   T  W  A A D M  WLS   G KI  VI  ND
Sbjct: 174 PDAEARTTYSVQTINDNGIKTQELHMDTGMWDTAMAKDKMDAWLSGPNGSKIEVVIANND 233

Query: 224 EMALGAIEAIKAADLNVKDFAIAGIDGVTDALHAVKAGEMT-SILQDARGQIQGSIDVAL 282
            MA+GAIEA++ A   +  F   G+D + +AL  +K+G+M  ++L DA+ Q + + ++A 
Sbjct: 234 GMAMGAIEALRGAGQKIPVF---GVDALAEALALIKSGDMAGTVLNDAQNQAKATFELAR 290

Query: 283 RAVKG 287
               G
Sbjct: 291 NLANG 295