Pairwise Alignments

Query, 334 a.a., Periplasmic binding protein/LacI transcriptional regulator (NCBI) from Rhodospirillum rubrum S1H

Subject, 309 a.a., rhizopine binding protein from Sinorhizobium meliloti 1021

 Score =  132 bits (333), Expect = 9e-36
 Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 11/295 (3%)

Query: 14  LLSAS--AAMAADAPKARIAVLMYGNKAEFVQLMERYGKEHPAVKAGIAEVTFYDGRYDA 71
           LLSA+  A  A  A    + + +  + + F+ ++ R G +  A K     V   D + D 
Sbjct: 4   LLSAAVLALFAGSAHAENVGITIARSDSAFLTIL-RNGMQDQAAKLDGVTVQVEDAQNDT 62

Query: 72  AVQNDQAQMAINTKQDAIVVNPMDYEANIDIATNAKMAGIPVVVTN-ARLNTD---EMTA 127
           + Q DQ Q  +++  DAI+V  +D ++   +   A  AGIP+V  N    + D   E  A
Sbjct: 63  SRQLDQVQNFVSSGVDAIIVVAVDGDSTPALTKMATDAGIPIVYANHPPADVDKLPETAA 122

Query: 128 EVVSDDVLGGYLEAKDVLTKLGCKGNVVIIEGPKGGSGEIQRGQGNEKALAECPAGAVKV 187
            V S+++  G LE K+V   LG KG   ++ GP      + R +     +A      + V
Sbjct: 123 FVGSNEIDSGTLETKEVCRLLGGKGAAYVLMGPLNNHSSLTRTKDIHDVIATDECKGMSV 182

Query: 188 LERKTANWSRAEALDLMQNWLSKHPGKINGVIGQNDEMALGAIEAIKAADLNVKDFAIAG 247
           +E ++ANW R EA ++M NWLS    + N +I  NDEMA+GAI+A+KAA +++    + G
Sbjct: 183 IEEQSANWDRLEAANIMTNWLST-GREFNAIIANNDEMAIGAIQAMKAAGVDMSKVVVGG 241

Query: 248 IDGVTDALHAVKAGEM-TSILQDARGQIQGSIDVALRAVKGPDYKPMSPIWEQYK 301
           ID   D L A+ AG++  ++ Q+A  Q   ++D A+   +  D K    IW  ++
Sbjct: 242 IDATPDGLAAMAAGDLDVTVFQNAIAQGAAAMDAAVALSR--DQKTARQIWVPFE 294