Pairwise Alignments

Query, 454 a.a., tRNA/rRNA cytosine-C5-methylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (282), Expect = 2e-29
 Identities = 94/291 (32%), Positives = 140/291 (48%), Gaps = 12/291 (4%)

Query: 151 RLEDELRALQAEAPLDLRVNALK-SDRESARLALARE-QVDTRPGALSPCALRA-EGRPN 207
           +L D + A Q      +RVN LK S  E  + A  +E Q+   P   +   + A E    
Sbjct: 54  QLADFIAACQRPLRKSIRVNTLKISVAEFCQRAAEKEWQLTPVPWCENGFWIDADESLVP 113

Query: 208 VAITAPFCDGLVEVQDEGSQMV--ALLCAVAPGMSVLDLCAGAGGKTLALAAGMENKGTL 265
           +  TA    GL  +Q+  S M   AL    A   SVLD+ A  G KT  +AA M+N+G L
Sbjct: 114 LGNTAEHMAGLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVL 173

Query: 266 VATDISEGRLARAQTRLQRAGVHNVTRKVLDPET-RKWLKRRKASFDVVLVDAPCSGTGT 324
           VA + S  R+      ++R G+ N      D      WL  R   FD VL+DAPCSG GT
Sbjct: 174 VANEFSASRVKVLHANIERCGIRNTALSNFDGCVFGGWLPER---FDAVLIDAPCSGEGT 230

Query: 325 WRRNPDARWKLTPDTISALNAEQSALLDRAAALVKPGGRLVYATCSLLPAENEAQIAAFL 384
            R++PDA    + ++I ++   Q AL++ A   +K GG LVY+TC+L   EN+ Q+   L
Sbjct: 231 IRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQ-QVCWHL 289

Query: 385 ERRDDYRALPVAETWAKVSPAPYPGAADVSWLRLTPASHGTDGFFVSILER 435
             +  Y      E+   +         +  +L + P  +  +GFFV+ + +
Sbjct: 290 --KQTYGDAVSFESLGNLFEHASLALTEEGFLHIFPQMYDCEGFFVAKIRK 338