Pairwise Alignments

Query, 576 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

Subject, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  231 bits (590), Expect = 5e-65
 Identities = 157/526 (29%), Positives = 274/526 (52%), Gaps = 24/526 (4%)

Query: 57  ILGLTGLVAAGLAGQFAFGVLGARTAFISGYGMMGDFRFTMMDHLSKLPLGFFTFQRTGA 116
           ++GL  LV  G+    AF  L    + +  Y M    R+    +L K  + F+  +  G 
Sbjct: 83  LIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPM--SIRWLAHRYLLKQSVSFYQDEFAGR 140

Query: 117 LTTTVAENVKMVEEMFTKVVNEIVAGFTLPLFIGILLVVIDWRMGLAAVASVPLAFAVLR 176
           ++T V +    V E   K ++  V        I ++L   DWR+ +  +  + +   V  
Sbjct: 141 ISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQADWRLMIPMLIWLAIYVTVQM 200

Query: 177 LTQGRFMRLSAKRVDVHAEVSGRLLEYIDGLRVIR--GYGLAGAKFAS--LRDSLDTQRR 232
               +  ++++++ D  + +SGR+++    +  ++   +     ++A   ++D L T  R
Sbjct: 201 YYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEGMQDFLGTVHR 260

Query: 233 VSVALEIQGGLGI-MAMAVVLEMGFIALLMVGAFAMLGGALSPASYLMAMVLAQKFYAPI 291
               + +  G  I + MA  L +  IA L +  +  +  A+S  +  +A+ L+ +    +
Sbjct: 261 ---QMRLVTGFNIWVEMANYLLVFTIAALSI--YLWITSAISVGAIAVAVSLSLRING-M 314

Query: 292 TRSLMLLVDIKYLSLA-LKRVQTLLNAPRL---PEPVEPKVPSNNAIVFDAVSFRYDEAG 347
           ++ +M  V   + ++  +    T+L  P         +P V  +  I FD VSF Y E  
Sbjct: 315 SKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGITFDDVSFHYGE-- 372

Query: 348 DEPALSEVTFTLREGTTTALVGPSGAGKSTVAHLIARFHDVTSGAVRIGGVDLRDMASDE 407
           ++  ++ +   ++ G    LVG SGAGKST+ +L+ RFHDV SG + I G  + ++  + 
Sbjct: 373 NKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPISEVTQES 432

Query: 408 LMRRVSMVLQDVHLFDDTVANNIRIGRSDASDEDVVAAARHAQCHAFIEALPQ-----GY 462
           L  ++ MV QD  L   ++ +NI  G  +A++E ++ A   A  H FI  L       GY
Sbjct: 433 LRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDPHGNSGY 492

Query: 463 QAPIGEGGAWLSGGQKQRLSIARALLKDAPIVLLDESTASLDPECEAAFHQAFKILAAGK 522
            A +GE G  LSGGQ+QR++I+R LLKDAP+++LDE+T++LD E EAA  ++   L  GK
Sbjct: 493 DAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLNELMQGK 552

Query: 523 TVLVIAHRLHTVVNADQIVVMERGRVVQTGTHGDLIASPGLYRTLW 568
           TV+ IAHRL T+   D+++V+++G++V+ GTH +LIA  G+Y  LW
Sbjct: 553 TVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLW 598