Pairwise Alignments

Query, 543 a.a., Chaperonin Cpn60/TCP-1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 545 a.a., chaperonin GroEL (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  691 bits (1783), Expect = 0.0
 Identities = 356/541 (65%), Positives = 446/541 (82%), Gaps = 3/541 (0%)

Query: 1   MAAKDVKFSSDARDRLLRGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI 60
           MAAK+V F +DAR ++L GV+ LANAVKVTLGPKGRNVV+DKSFG+P ITKDGVSVAKEI
Sbjct: 1   MAAKEVVFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEI 60

Query: 61  ELKDKFENMGAQMLREVASKSADVAGDGTTTATVLAQAIVREGSKAVAAGMNPMDLKRGI 120
           EL+DKFENMGAQM++EVASK+ D AGDGTTTATVLAQAIV EG KAVAAGMNPMDLKRGI
Sbjct: 61  ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI 120

Query: 121 DLAVAAVVKDVKTRSRKIATNDEIAQVGTISANGDEEVGKIIARAMDKVGHEGVITVEEA 180
           D AV A V ++K  S+  A +  IAQVGTISAN DE +G+IIA AM+KVG EGVITVEE 
Sbjct: 121 DKAVIAAVAELKNLSQDCADSKAIAQVGTISANSDESIGQIIATAMEKVGKEGVITVEEG 180

Query: 181 KGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILIHEKKLSGLQPLLPVLEAV 240
           + L+ ELDVVEGMQFDRGYLSPYF+   E    +L++P++L+ +KK+S ++ LLP+LE +
Sbjct: 181 QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGL 240

Query: 241 VQSGRPLLIIAEDVEGEALATLVVNRLRGGLKVASVKAPGFGDRRKAMLEDIAILTGGQV 300
            ++G+PLLI+AEDVEGEALATLVVN +RG +KVA+VKAPGFGDRRKAML+D+AILTGG V
Sbjct: 241 AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV 300

Query: 301 ISEDLGIKLETVTLDMLGTAKTVTITKDNTTIVDGAGVKADIDARCAQIRATIEDTTSDY 360
           I+E++G++LE  TL+ LGTAK V ITKDNTTI+DG G +A I+AR +QI+  IE++TSDY
Sbjct: 301 IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDY 360

Query: 361 DREKLQERLAKLSGGVAVIRVGGASEVEVKEKKDRVDDAMHATRAAVEEGIIAGGGVALL 420
           D+EKLQER+AKL+GGVAVI+VG A+EVE+KEKK RV+DA+HATRAAVEEG++ GGGVAL+
Sbjct: 361 DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI 420

Query: 421 HAAKALDALSPANADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLESSDADFGYN 480
             A  +  +  AN DQK G+ I  RA++AP+RQIA NAG + +VVA   +++   ++GYN
Sbjct: 421 RVASKIADVEVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANN-VKNGSGNYGYN 479

Query: 481 AQTGVYENLVKVGVIDPTKVVRTALQGAASVASLLITTEAMVAEIPEKKPALPAGGGMGD 540
           A    Y +++++G++DPTKV R+ALQ AAS+A L+ITTEAMVAE+P  K   P  GGMG 
Sbjct: 480 AGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVAELP--KADAPDMGGMGG 537

Query: 541 M 541
           M
Sbjct: 538 M 538