Pairwise Alignments

Query, 688 a.a., type II secretion system protein E (NCBI) from Rhodospirillum rubrum S1H

Subject, 788 a.a., type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Dechlorosoma suillum PS

 Score =  273 bits (699), Expect = 2e-77
 Identities = 191/598 (31%), Positives = 303/598 (50%), Gaps = 77/598 (12%)

Query: 135 DQLLAGGLISRDQMRVAHIEQKRSGAPLGQVLVDLGFITDGVLAEVLAQSSGHDRFDAAS 194
           D L++  +IS  ++ +A    +R G  L +VLV    +    + + LA+  G        
Sbjct: 201 DGLVSDAVISAAELDLAQRSARRKGLDLEEVLVKEFQVKPAAIGQALAKYFGD------- 253

Query: 195 TLADPAALAPLPEREARRLRVFPVGLRGSLLRLAMVD----PLD-------VVAIDEVRR 243
                      P    R  RV P+ L  +L R  +      P++       VVA D  R 
Sbjct: 254 -----------PYEPYRSERVKPIDLLRNLKRDYLESQQWVPVEETREGVVVVATDPERV 302

Query: 244 HYGRDV-------RIEPVVSSEAEIAQAIDRSYGHVLALDGVLRELETLGAAGADPESLR 296
              R V       ++   V++  E  Q +D  +G +  +  V   L  LG    +   + 
Sbjct: 303 RNSRVVNNIFPKSKVVYRVTTNREFLQVLDHFFGALADVASVGDLLSDLGDGDDEAGDVV 362

Query: 297 DTD-----SHPVVRLVNALLLDAVKRRASDLHFEPQGAFLR--VRLRIDGTLSQTLIFHK 349
             D      + +V+LVN ++++A ++ ASD+H EP+    +  +R R DG+L   +    
Sbjct: 363 GDDVSAAAENELVKLVNKIIIEASQQGASDIHIEPRPGKEKTLIRFRKDGSLVPYIEIPA 422

Query: 350 QYWPAVAQRLKILAGMNIADRLGPQDGRFSMA-IAHRKIDFRASVIPTVHG-ENMVLRVL 407
            Y  A+  RLKI+  ++I+++  PQDG+          I+ R + IPT  G E++V+R+L
Sbjct: 423 SYRNALIARLKIMCDLDISEKRKPQDGKIKFKKYGPLDIELRVATIPTAGGMEDVVMRIL 482

Query: 408 DRSATPLKLEQLALAHGTLDPLELLVRRPEGLLLVTGPTGSGKTTTLYALMDHISGPEIT 467
             +  P+ L+ L L     + L+ ++ +P GL  V GPTGSGKTTTL++++ HI+ P+  
Sbjct: 483 -AAGEPIPLDSLGLTPHNHETLKSIISKPYGLFFVCGPTGSGKTTTLHSILGHINTPDTK 541

Query: 468 IVTLEDPVEYDLPLLRQTQVREGARLGFADGIRALLRQDPDVMLVGEIRDADTAAMALRA 527
           I T EDPVE     LRQ Q+ + A L FA  +R+ LR DPDV++VGE+RDA+T  + + A
Sbjct: 542 IWTAEDPVEITQKGLRQVQINKKAGLDFATVMRSFLRADPDVIMVGEMRDAETTGIGIEA 601

Query: 528 AMTGHQVYATLHANDAPSALPRLMDLGLRPGLLAGSLIGVLAQRLVRRLCPHCRQSYRAS 587
           ++TGH V+ATLH N AP ++ RL+D+G+ P   A +L+G+LAQRL +RLC  C+++Y+ S
Sbjct: 602 SLTGHLVFATLHTNSAPESVIRLLDMGMDPFNFADALLGILAQRLAKRLCKECKEAYQPS 661

Query: 588 PVECKILGLD-----------ATDPP--------------------EIFRARGCEACGQT 616
           P + K L  +             DP                      ++R +GC  C  T
Sbjct: 662 PEDMKRLLTEYCEELTNTDSWKKDPKGSYEAVYRDWNSRYAKDGQFTLYRPKGCPVCNDT 721

Query: 617 GYHGRVPISELLSISPEIDDLIASAAPLAEIRALATRQGYRPMLDDGARLVCEGVIDV 674
           GY GRV + EL++ +  +  LI   A +AE+ A A   G R +  DG   V +G+ D+
Sbjct: 722 GYKGRVGLHELMAGTDGVKKLIQEHARVAELVACALNDGMRTLKMDGIDKVLQGITDM 779