Pairwise Alignments

Query, 265 a.a., TPR repeat, Tetratricopeptide TPR_4 (NCBI) from Rhodospirillum rubrum S1H

Subject, 363 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 49.7 bits (117), Expect = 9e-11
 Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 10/148 (6%)

Query: 85  RTAEALAAYRAATRAAPALAEAHLGLGASLQALGRPTEAAGAYERALAL---RPGDALAR 141
           R  EALA+Y  A    P   EA       L+ LGR  EA  +YE+ALA+   +P     R
Sbjct: 45  RWTEALASYNCALEITPQRQEALNNRAIVLEHLGRLPEAVESYEQALAIDRQQPEVWNNR 104

Query: 142 ARLVAVLGDLAPGIA-LERLGRLAVAYPDDAEITGRIGLQLMRQGRPLAALGAFEQAAAL 200
             ++  LG L   IA  ++   LA  Y   A+     G  L +QGR   A+  +EQ+ A+
Sbjct: 105 GIVLRKLGRLEDAIASYQQAIALAAHY---AQAWANCGFALWQQGRYREAVRHYEQSVAI 161

Query: 201 AP--GDPVRQV-NLAVAADRAGQAARAL 225
            P      RQ+  + ++ D+  QA R L
Sbjct: 162 DPDQSSAWRQLGQIYLSVDQPDQALRCL 189



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 49/182 (26%), Positives = 70/182 (38%), Gaps = 17/182 (9%)

Query: 63  VAVAGGSAARLVEEGYRALAEGRTAEALAAYRAATRAAPALAEAHLGLGASLQALGRPTE 122
           VA+    ++   + G   L+  +  +AL     A    P  A A    G +L  LG+   
Sbjct: 159 VAIDPDQSSAWRQLGQIYLSVDQPDQALRCLDQAIALQPQQATAWTWRGHALYNLGQYAA 218

Query: 123 AAGAYERA---------LALRPGDALAR-ARLVAVLGDLAPGIALERLGRLAVAYPDDAE 172
           A  +YE A         L+++ G  LA+  R    L   A  I  +  G  A      AE
Sbjct: 219 ALTSYENAELLGDRPLLLSIQRGHTLAQLERYEEALASYA-AILPQLTGEAA------AE 271

Query: 173 ITGRIGLQLMRQGRPLAALGAFEQAAALAPGDPVRQVNLAVAADRAGQAARALAAYRKAV 232
           +    GL         AAL AF+QA A  P       N A    R  Q   A+A  ++A+
Sbjct: 272 VAYYQGLVWAYLQDWTAALAAFDQAIAGNPDLAEAWYNRAALHARLDQPVAAIADLQQAI 331

Query: 233 TL 234
            L
Sbjct: 332 AL 333