Pairwise Alignments

Query, 265 a.a., TPR repeat, Tetratricopeptide TPR_4 (NCBI) from Rhodospirillum rubrum S1H

Subject, 627 a.a., Tetratricopeptide repeat-containing protein from Paraburkholderia bryophila 376MFSha3.1

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 56/176 (31%), Positives = 72/176 (40%), Gaps = 36/176 (20%)

Query: 82  AEGRTAEALAAYRAATRAAPALAEAHLGLGASLQALGRPTEAAGAYERALALRPGDALAR 141
           A GR  +A  A+R + R  P  A +H  LG +L ALGR  EA  ++ R L LRPG A A 
Sbjct: 127 AAGRHEDAADAFRRSLRLQPDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGHAGAL 186

Query: 142 ARLVAVLGDLAPGIALERLGRLAVAYPDDAEITGRIGLQLMRQGRPLAALGAFEQAAALA 201
             +         G++L  LGR   A P                         F+ A A  
Sbjct: 187 NNM---------GMSLNALGRANEAIP------------------------CFKAALAAE 213

Query: 202 PGDPVRQVNLAVAADRAGQAARALAAYRKAVTL---LRAGGETAGVDLAALSRRAR 254
           P       NLA   D  G  A A+A++  A+ L   L       G  LAAL R A+
Sbjct: 214 PRFVAAHFNLANTFDATGLHAEAVASFEAALALQPNLPPAIFGMGNALAALGRHAQ 269



 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 54/171 (31%), Positives = 68/171 (39%), Gaps = 19/171 (11%)

Query: 68  GSAARLVEEGYRALAEGRTAEALAAYRAATRAAPALAEAHLGLGASLQALGRPTEAAGAY 127
           G A  L   G    A GR  EA+  ++AA  A P    AH  L  +  A G   EA  ++
Sbjct: 181 GHAGALNNMGMSLNALGRANEAIPCFKAALAAEPRFVAAHFNLANTFDATGLHAEAVASF 240

Query: 128 ERALALRPGDALARARLVAVLGDLAPGIALERLGRLAVAYPDDAEITG----------RI 177
           E ALAL+P          A+ G    G AL  LGR A A P      G           +
Sbjct: 241 EAALALQPN------LPPAIFG---MGNALAALGRHAQAIPYLERSVGLDPQFALAWLSL 291

Query: 178 GLQLMRQGRPLAALGAFEQAAALAPGDPVRQVNLAVAADRAGQAARALAAY 228
           G      G    A+ AF+QA  + P      +N A+A    G  AR L  Y
Sbjct: 292 GTAHQALGAHATAVRAFDQALRVQPDLASAHMNRALAWLALGDFARGLPEY 342



 Score = 51.6 bits (122), Expect = 4e-11
 Identities = 51/181 (28%), Positives = 72/181 (39%), Gaps = 4/181 (2%)

Query: 75  EEGYRALAEGRTAEALAAYRAATRAAPALAEAHLGLGASLQALGRPTEAAGAYERALALR 134
           +  + A  +GR  +A   YRA     P   +A   LG      G+  EAA    RA+ LR
Sbjct: 18  DRAFAAHRDGRLEDAERGYRATLDGNPVHVDALHLLGVLRHQQGQHAEAAELVRRAVDLR 77

Query: 135 PGDALARARLVAVLGDLAP-GIALERLGRLAVAYPDDAEITGRIGLQLMRQGRPLAALGA 193
           P DA  +  L   L  L     A+++        P        +G      GR   A  A
Sbjct: 78  PQDAALQLNLGNALKALGQIDEAIDQFRNALTLAPSFPMAHYNLGNAYTAAGRHEDAADA 137

Query: 194 FEQAAALAPGDPVRQVNLAVAADRAGQAARALAAYRKAVTLL--RAGG-ETAGVDLAALS 250
           F ++  L P D     NL  A    G+   A+A++R+ + L    AG     G+ L AL 
Sbjct: 138 FRRSLRLQPDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGHAGALNNMGMSLNALG 197

Query: 251 R 251
           R
Sbjct: 198 R 198



 Score = 27.3 bits (59), Expect = 8e-04
 Identities = 17/47 (36%), Positives = 21/47 (44%)

Query: 82  AEGRTAEALAAYRAATRAAPALAEAHLGLGASLQALGRPTEAAGAYE 128
           A G  A A+ A+  A R  P LA AH+    +  ALG        YE
Sbjct: 297 ALGAHATAVRAFDQALRVQPDLASAHMNRALAWLALGDFARGLPEYE 343