Pairwise Alignments

Query, 265 a.a., TPR repeat, Tetratricopeptide TPR_4 (NCBI) from Rhodospirillum rubrum S1H

Subject, 716 a.a., Tetratricopeptide (TPR) repeat from Paraburkholderia bryophila 376MFSha3.1

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 76/233 (32%), Positives = 96/233 (41%), Gaps = 38/233 (16%)

Query: 47  DLAPAEGAFLAEEAPRVAVAGGSAARLVE-------------------EGYRALAE---- 83
           D +  +GA +   A  + +AG S+ RL E                   E Y +L E    
Sbjct: 41  DESALDGAAIHAMADALNLAGASSCRLGEPDDAERYWRRCLRMMPGYVEVYESLGELLKA 100

Query: 84  -GRTAEALAAYRAATRAAPALAEAHLGLGASLQALGRPTEAAGAYERALALRPGDALARA 142
            GR + A A YR      P  A+AH  LGA L A G   +A  +Y RAL LRP  A A  
Sbjct: 101 RGRLSAAKAIYRQLIVLQPGHADAHNQLGAVLYAQGYHEDAEASYRRALVLRPDHAEAHY 160

Query: 143 RLVAVLGDLAPGIALERLGRLAVAY-------PDDAEITGRIGLQLMRQGRPLAALGAFE 195
               VL       AL+RL     AY       P  AE    +G  LM  GR   A  A+ 
Sbjct: 161 NHGVVLH------ALQRLDEAEAAYRETLVRLPAHAEAHNNLGNVLMDLGRVAQADAAYR 214

Query: 196 QAAALAPGDPVRQVNLAVAADRAGQAARALAAYRKAVTLLRAGGETAGVDLAA 248
           +A  + P  P    NLA A   A +   A  A R A+T +R     A V+L A
Sbjct: 215 EALTIRPQYPEALNNLAGALKAAQRLTEAELACRLALT-MRPDYAEAHVNLGA 266



 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 54/151 (35%), Positives = 64/151 (42%), Gaps = 1/151 (0%)

Query: 85  RTAEALAAYRAATRAAPALAEAHLGLGASLQALGRPTEAAGAYERALALRPGDALARARL 144
           R  EA AAYR      PA AEAH  LG  L  LGR  +A  AY  AL +RP    A   L
Sbjct: 171 RLDEAEAAYRETLVRLPAHAEAHNNLGNVLMDLGRVAQADAAYREALTIRPQYPEALNNL 230

Query: 145 VAVLGDLAPGIALERLGRLAVAY-PDDAEITGRIGLQLMRQGRPLAALGAFEQAAALAPG 203
              L         E   RLA+   PD AE    +G  L    R   A  A+ +A AL   
Sbjct: 231 AGALKAAQRLTEAELACRLALTMRPDYAEAHVNLGATLTDLQRLPEAEAAYRKAIALRAD 290

Query: 204 DPVRQVNLAVAADRAGQAARALAAYRKAVTL 234
                 NL +   +  +   A  AYR+AV L
Sbjct: 291 YAEAYYNLGITLFKLERLTEAAEAYREAVRL 321



 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 67/198 (33%), Positives = 85/198 (42%), Gaps = 10/198 (5%)

Query: 7   SLCLALGAFAPLSLAAEGALSEAIESPTPGAGLEGAEVLGDLAPAEGAFLAEEAPRVAVA 66
           ++ + LG  A    A   AL+   + P     L GA     L  A+    AE A R+A+ 
Sbjct: 198 NVLMDLGRVAQADAAYREALTIRPQYPEALNNLAGA-----LKAAQRLTEAELACRLALT 252

Query: 67  --GGSAARLVEEGYRALAEGRTAEALAAYRAATRAAPALAEAHLGLGASLQALGRPTEAA 124
                A   V  G       R  EA AAYR A       AEA+  LG +L  L R TEAA
Sbjct: 253 MRPDYAEAHVNLGATLTDLQRLPEAEAAYRKAIALRADYAEAYYNLGITLFKLERLTEAA 312

Query: 125 GAYERALALRPGDALARARLVAVLG--DLAPGIALERLGRLAVAYPDDAEITGRIGLQLM 182
            AY  A+ LRPG A A   L  VL   D  P  A+E   +    +PD AE    +G  L 
Sbjct: 313 EAYREAVRLRPGIAPAHNNLGCVLRLLDCLPE-AVECFEQALSVHPDLAEAHYNLGATLA 371

Query: 183 RQGRPLAALGAFEQAAAL 200
           +  R   A  A+ +A  L
Sbjct: 372 QLKRWPGAESAYRRALEL 389



 Score = 42.4 bits (98), Expect = 3e-08
 Identities = 27/61 (44%), Positives = 31/61 (50%)

Query: 88  EALAAYRAATRAAPALAEAHLGLGASLQALGRPTEAAGAYERALALRPGDALARARLVAV 147
           EA+  +  A    P LAEAH  LGA+L  L R   A  AY RAL LR     AR  L  +
Sbjct: 344 EAVECFEQALSVHPDLAEAHYNLGATLAQLKRWPGAESAYRRALELRADYGEARFGLATL 403

Query: 148 L 148
           L
Sbjct: 404 L 404



 Score = 24.6 bits (52), Expect = 0.006
 Identities = 15/40 (37%), Positives = 17/40 (42%)

Query: 89  ALAAYRAATRAAPALAEAHLGLGASLQALGRPTEAAGAYE 128
           A +AYR A        EA  GL   L  +GR  E    YE
Sbjct: 379 AESAYRRALELRADYGEARFGLATLLLGMGRFDEGWRLYE 418