Pairwise Alignments

Query, 312 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 291 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  124 bits (312), Expect = 2e-33
 Identities = 87/280 (31%), Positives = 140/280 (50%), Gaps = 19/280 (6%)

Query: 38  GLYAVLVLFALYYLLPLFVMLLTSVKTLDDIRAGSLIALPRTLTFEPWLKAWDSACVGVQ 97
           GLYA +    +Y L P +  +++S KT   +   +L+     L F  + + +D+      
Sbjct: 26  GLYAGVAAVLVYMLFPYYWAIVSSTKTGQALYQFTLLP---ALDFSNYRQLFDN------ 76

Query: 98  CAGLKPYFL----NSLLLVVPAVAISTVLGALNGYALTKWRFPGSQLIFALMLFGCFIPF 153
                P F+    NS ++ + + A+S V+G L  YAL +  FP  +++   +L     P 
Sbjct: 77  -----PVFMGALVNSGVVALVSTAVSLVIGILAAYALGRLHFPPGRIVLIAVLMISVFPQ 131

Query: 154 QVVLLPMARVLGLAGLAGSIQGLILVHVVYGLSFTTLFFRNFYMTVPDELVRAATIDGAG 213
            VVL  M  V+G  GL      LI+ +++  L FTT    +F   +P+EL  AA IDG  
Sbjct: 132 VVVLSGMFEVIGWLGLYNRPSALIVSYLILTLPFTTWILTSFIRDLPNELEEAALIDGCS 191

Query: 214 FFRIFFSILLPMSPPIIVVTIIWQFTQIYNDFLFGVSFTVSG-GQPVTVALNNLVASSTG 272
             RI   +LLP+  P I  T +  F   +N+FLF ++F ++   + V VA+  L  SS  
Sbjct: 192 RLRILTHVLLPLMGPAIASTGLLSFILAWNEFLFALTFILTDENRTVPVAIGLLTGSSRY 251

Query: 273 VKEYNVDMAAAILTALPTLVVYAVAGKYFIRGLSAGAVKG 312
              +   MAA++   LP LV+  +  +  + GL++GAVKG
Sbjct: 252 EYPFGQIMAASVTVTLPLLVLVLIFQRKIVAGLTSGAVKG 291