Pairwise Alignments

Query, 312 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 270 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  113 bits (282), Expect = 6e-30
 Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 13/276 (4%)

Query: 39  LYAVLVLFALYYLLPLFVMLLTSVKTLDDIRAGSLIALPRTLTFEPWLKAWDSACVGVQC 98
           LYA L+L +  ++ P +   +T+VK+  ++     +  P    +E +  AW     G   
Sbjct: 6   LYATLILLSALFIAPFYWTFMTAVKSTAELYRFPPVLWPSEWHWENFAAAWSKQPFGT-- 63

Query: 99  AGLKPYFLNSLLLVVPAVAISTVLGALNGYALTKWRFPGSQLIFALMLFGCFIPFQVVLL 158
                Y  NSL++VV +     +  +L  +   ++RFPG   +F L+L    IP+ V ++
Sbjct: 64  -----YLSNSLIVVVLSTIGQLLSSSLVAFGFARFRFPGRDALFVLLLATMMIPWDVKMI 118

Query: 159 PMARVLGLAGLAGSIQGLILVHVVYGLSFTTLFFRNFYMTVPDELVRAATIDGAGFFRIF 218
           P+     + G   +++ LI V   +  +F     R + MT+P E+  AA +DGA  F I+
Sbjct: 119 PLYMEFNMLGWINTLKPLI-VPAYFADAFFVFLLRQYIMTIPMEIDEAARMDGANSFDIY 177

Query: 219 FSILLPMSPPIIVVTIIWQFTQIYNDFLFGVSFTVSGGQPVTVALNNLVASSTGVKEYNV 278
           + I LP+  P +V+   + F   +ND+L G    ++     T+ L   ++   G+ E +V
Sbjct: 178 WRIHLPLMLPALVLVGTFHFMNAWNDYL-GPLIFLNDQSKYTLTLG--LSMFKGLHEIDV 234

Query: 279 DMAAAI--LTALPTLVVYAVAGKYFIRGLSAGAVKG 312
              AAI  +  LP L ++ +A +Y + G    +VKG
Sbjct: 235 TSIAAITVILCLPPLALFFLAQRYIMDGAVGSSVKG 270