Pairwise Alignments

Query, 297 a.a., Squalene/phytoene synthase (NCBI) from Rhodospirillum rubrum S1H

Subject, 277 a.a., squalene synthase HpnD from Dechlorosoma suillum PS

 Score = 66.2 bits (160), Expect = 8e-16
 Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 8/265 (3%)

Query: 25  AGTENFPVGSVLLPARLRPHVARFYAFARAIDDIADSPDLDAAAKIDRLQGFEEAITGRD 84
           A   +F +   LLP   +  +   YAF R +DD+ D  +    A I +L  + + +    
Sbjct: 13  ASGSSFTISFTLLPREKKQAMTALYAFCREVDDVVDEVEDPQVAAI-KLAWWRQEVERLY 71

Query: 85  TTDPAYAKGHALRVSLEATGVPAIHGVELIAAFKQDAVKGRYATWAEMMDYCRLSAAPVG 144
              P +    AL   ++   +     +E+I   + D  + RYA +  +  YC   A+ VG
Sbjct: 72  DGTPQHPVAQALAEVIKTIPLDKELLLEIIDGMEMDLTQARYADFKSLQLYCYRVASVVG 131

Query: 145 RYLIDLHG-GSRAGYASSDALCVALQVINHLQDCQDDFRVLDRVYLPADWLAAEGASVSD 203
               ++ G   RA    +  L +A Q+ N ++D  +D R   R+YLP D L       +D
Sbjct: 132 LLSAEIFGMTQRATRKYAHDLGMAFQLTNIIRDVGEDAR-RGRIYLPMDELQRFNVPAAD 190

Query: 204 LDRAACTPGLRRVLDRCLEGTRRLLDAA-RPLPGDIIDRRLGLEAAVIVSIAQTLTGRLA 262
           +  +  T     ++   +E  R   + A   LP    DRR      V+ +I ++L   +A
Sbjct: 191 ILNSRPTEAFAALMQFQIERARGFYEQAFAALPA--ADRRQQKPGLVMAAIYRSLLEEIA 248

Query: 263 RQDP--LAQRVKLGKAATAFCAARA 285
            +    L  R+ +     A+ A +A
Sbjct: 249 AEPELVLTHRISIPPGRKAWLALKA 273