Pairwise Alignments

Query, 492 a.a., Type I secretion membrane fusion protein, HlyD (NCBI) from Rhodospirillum rubrum S1H

Subject, 389 a.a., type I secretion membrane fusion protein, HlyD family from Phaeobacter inhibens DSM 17395

 Score =  166 bits (419), Expect = 2e-45
 Identities = 125/426 (29%), Positives = 210/426 (49%), Gaps = 64/426 (15%)

Query: 67  DSRQTIRAGWLIILVAFGGLG---LWAATAPLSSAVGAPGTIVVESNRKTVQHLEGGIIK 123
           D R+T R    II +  G L    LWA+ A +   V A G +V  S  + VQ+LEGGI+ 
Sbjct: 7   DLRETSRGASRIIYLVAGALVVFLLWASFAWVDEIVRADGEVVSSSRSQIVQNLEGGILA 66

Query: 124 EILVKEGDRVHQGDPLIRLETTQALASAAVVSNQFETYQALEARLVAERDEQKTITFPPD 183
           E+ V +GD V  G  L RL+ T+  A+A  + ++ +  +  + RL AE +       P +
Sbjct: 67  ELHVHQGDVVKAGQILARLQDTKFRAAADDLQDRIDALEIKQYRLEAELEGAFDFNVPEE 126

Query: 184 LIAVAK-LKPETAEILQAQQQQFDERHKSIEGQVAILQKRIAQSRQEIEGLKVQRQSKKR 242
           L   +  +      +L A+Q  F  R  S              +R+ ++ LK +  + KR
Sbjct: 127 LADRSPGIYTSERALLNARQTDFTSRRDS--------------AREILDQLKDELANMKR 172

Query: 243 QLEIFQDEIVGLRELLAKGYTPRTRILAMEREMTRLEGEVGTDTSSMARAEQAVGEAELQ 302
              + + EIV L E+                                 R++++V +A+ +
Sbjct: 173 ---LHKKEIVALIEV--------------------------------NRSQKSVSDAQAK 197

Query: 303 I----IQTRQQFREDVVGQLREVQTKLSELRERGTVATDVLSRTVLLASQAGVIQNLAVH 358
                 Q+  +  ED    LRE+ +   ELR    +A D L+RTV+ +  AG++ +LAV 
Sbjct: 198 YNEIGTQSELELAEDYSKTLRELTSYRQELR----LAQDQLNRTVITSPMAGIVNSLAVT 253

Query: 359 TLGGIIKPGETLMEIVPEDDRLVIEAQISPRDIDNVVPGMDTEVRFSAFNSRTIPIIDGV 418
           T+GG+I+PGE ++EI+P  + + +EA++ P +I +V PG D  ++ SA++      + G 
Sbjct: 254 TIGGVIRPGEEIVEIIPLGEEMFVEARVKPENIASVQPGQDATIKLSAYDYTIYGSLRGK 313

Query: 419 LSQVSADRFVNERD--SSSYYKARIEVSDEELA-KLGGLALRAGMPVDVMIKTGERTVLH 475
           +  VSAD F +ER+  +  YY+  ++V   E   +   + +R GM     ++TG +T+L+
Sbjct: 314 VDFVSADTFEDERNPRAEPYYRVTVKVDRSEFTERQQAIEIRPGMRATAELQTGSKTILN 373

Query: 476 YFLKPL 481
           Y LKPL
Sbjct: 374 YMLKPL 379