Pairwise Alignments

Query, 492 a.a., Type I secretion membrane fusion protein, HlyD (NCBI) from Rhodospirillum rubrum S1H

Subject, 466 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  187 bits (474), Expect = 9e-52
 Identities = 114/405 (28%), Positives = 214/405 (52%), Gaps = 9/405 (2%)

Query: 88  LWAATAPLSSAVGAPGTIVVESNRKTVQHLEGGIIKEILVKEGDRVHQGDPLIRLETTQA 147
           +WAA A L         ++     + +Q+LEGGII EI V+EG  V +G  L+RL+   A
Sbjct: 69  VWAAFASLDEVTRGQAQVIPSQRIQEIQNLEGGIISEIFVREGQIVEKGTVLVRLDNESA 128

Query: 148 LASAAVVSNQFETYQALEARLVAERDEQKTITFPPDLIAVAKLKPETAEILQAQQQQFDE 207
            +      ++   + A  ARL  E   +  + +PP+++  A       +++  Q    + 
Sbjct: 129 ASFFRDAVSKSYEHMAAIARLEGEMAGKDPV-YPPEVVQKAP------QVVADQTSIHNA 181

Query: 208 RHKSIEGQVAILQKRIAQSRQEIEGLKVQRQSKKRQLEIFQDEIVGLRELLAKGYTPRTR 267
           R + +E ++++L+ +++Q RQE++ +  ++      L + Q++    R L+ K    +  
Sbjct: 182 RKRQLELELSVLESQLSQKRQEVDEMVGRQGQLGASLRVAQEQRDIARPLVEKQIYSKVD 241

Query: 268 ILAMEREMTRLEGEVGTDTSSMARAEQAVGEAELQIIQTRQQFREDVVGQLREVQTKLSE 327
            L++E+ + +L G++ +   ++ +A  AV E E ++   + + R   V ++ + + +L+ 
Sbjct: 242 YLSLEQRVIQLRGDISSLAVNIPKARSAVHEVEQRLSHRKAEVRSQAVEEINKRRVELNS 301

Query: 328 LRERGTVATDVLSRTVLLASQAGVIQNLAVHTLGGIIKPGETLMEIVPEDDRLVIEAQIS 387
           LRE  +   D ++RT L A   G ++ + ++T GG++KPGE+++E+VP DD L++EA+I 
Sbjct: 302 LRETLSAGEDRVTRTDLRAPVRGTVKRIIINTQGGVVKPGESILELVPLDDTLLVEARIR 361

Query: 388 PRDIDNVVPGMDTEVRFSAFNSRTIPIIDGVLSQVSADRFVNERDSSSYYKARIEVSDEE 447
           P DI  + PG    V+ +A++      ++  L Q+SAD  + +R    YY  ++      
Sbjct: 362 PADIAFLHPGQKAIVKVTAYDFSIYGGLEAGLEQISADT-IEDRKGEFYYLVKLRTKKNA 420

Query: 448 LAKLG-GLALRAGMPVDVMIKTGERTVLHYFLKPLEDALFHGLIE 491
           +   G  L +  GM   V I TG++TVL Y LKP+  A  + L E
Sbjct: 421 ITYRGENLPIMPGMTATVDILTGKKTVLDYLLKPILKAQQNALRE 465