Pairwise Alignments

Query, 832 a.a., EAL domain-containing protein from Rhodanobacter denitrificans MT42

Subject, 879 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  307 bits (786), Expect = 2e-87
 Identities = 204/541 (37%), Positives = 301/541 (55%), Gaps = 18/541 (3%)

Query: 284 ERLHERHRFFEMSQEIFCILDPHTERLVQFNPSLPRITGYGASELTSRSYREFLQPEEPR 343
           E+L      F+ S E   + D H   +   N +   ITGY   EL  ++ R F      +
Sbjct: 324 EQLTLATNVFKHSFEGVVVTDRHGN-ITDVNGAFYEITGYSREELLGQNPRLFNSGRHEK 382

Query: 344 DGSDPMV--VLGRSGEQVHEFVNRCRCRDGSERLLEWVSFAAPDGL-----LYAVARDIT 396
              + M   +LG  G+   E  NR +  DG+         A  D +       AV  DI+
Sbjct: 383 AFFETMWNNLLG-GGKWNGEIWNRRK--DGTIFPQNITISAIYDEVGEIRYFVAVFADIS 439

Query: 397 ERRRVEAELAHASSHDPVSGLPQHLLLGREVGDVL---KDSTEPVWVLVIGLDRFQGVNE 453
            +++ EA+LAH +  DP++ LP  + L  ++   +   K     +  + I +D F+ +N+
Sbjct: 440 AQKQSEAQLAHLAYFDPLTHLPNRMKLMIQLKQEIMHAKRLNSQLATVFIDVDLFKHIND 499

Query: 454 SVGHLTGDDVLRQLAGRLQAALAGQGRVARFAGDEFVVTATGLSA-DGALALAERLRAAV 512
           S GH  GD++L +LA RL++ L  Q  ++R   DEFV   +G+   + A A   +LR   
Sbjct: 500 SFGHSIGDEMLVELAKRLRSQLQEQDVLSRIGSDEFVALISGIQYHEDATAAINQLRQVF 559

Query: 513 AEP--LEGGDYRLLLTASIGISHSPDHGTDPNDLLRRAEAAMNQAKREGRDRVSMFSVEQ 570
            +P  +  GD+ L LTA++G+S  P  G++ + LLR A+AAM +AK EGR+  + ++   
Sbjct: 560 EQPFVVSTGDH-LRLTATMGVSLYPSDGSNADTLLRNADAAMYRAKSEGRNNYAFYTESL 618

Query: 571 MRDLEDRLVMGNQLRNAIRHDELELHYQPQYRAADRRLTGFEALLRWNSRQLGRVPPARF 630
            ++  + L + + L  A+  + L L YQP+     R+  G EALLRWN   LG++ P+ F
Sbjct: 619 TKESIEHLKLQSALYGALEQNALYLMYQPKVDLVTRKTVGVEALLRWNDPILGQISPSVF 678

Query: 631 IPIAEALGLMPEIGEWVLDAACRQLRAWLDRGHRGFTVAVNVSAQQLQRHGLVAQVGAAL 690
           IP+AE  GL+ +IG WVL+ AC+Q   WL  G +   +AVNV+ QQLQR+  V  V   L
Sbjct: 679 IPVAEKSGLIYDIGLWVLETACQQGVHWLAAGKQFGRIAVNVAGQQLQRNSFVEDVKRIL 738

Query: 691 QRHDVPPAMLDIEITESSFMENVWRVQRTLAELKALGIRLSLDDFGTGYSSLAYLKQFPI 750
            +  +P   L++E+TES  M N     R L  L  LGI LS+DDFGTGYSSL YLK+ PI
Sbjct: 739 TQTGLPATCLELEVTESVMMNNPDVAIRDLKLLGDLGIVLSVDDFGTGYSSLNYLKKLPI 798

Query: 751 DKLKIDQAFVRALPADTADASIVRTIIAVAHELRMHVAAEGVETAAQADFLAAAGCDELQ 810
            KLKIDQ+FVR +P DT + +I + +I + H L++ + AEGVETA QADFL    CD+ Q
Sbjct: 799 HKLKIDQSFVRDIPFDTNNTAIAKAVIVLGHALKLEIVAEGVETAEQADFLTQNLCDQAQ 858

Query: 811 G 811
           G
Sbjct: 859 G 859