Pairwise Alignments

Query, 832 a.a., EAL domain-containing protein from Rhodanobacter denitrificans MT42

Subject, 752 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  333 bits (855), Expect = 2e-95
 Identities = 225/704 (31%), Positives = 361/704 (51%), Gaps = 25/704 (3%)

Query: 126 ILEGIAAQRPLVESLERIARLHETMNPGALCSLLLLDEDGRHVLHGAAPSLPEAYSRTLH 185
           IL  +    PL + L  +    E    G   S+LLL EDG+ VL GAAP LP++Y++ +H
Sbjct: 30  ILSMLLNGAPLADILHALVLKIEDQRLGTHASVLLLSEDGKRVLTGAAPHLPDSYNQVIH 89

Query: 186 GLEIGEAHGSCGTAAWRGERVVVADIAGHPYWENYRGPALAHGLKACWSTPVFGSHHEVL 245
           G+EIG   GSCGTAA+ G+RV+V DI  HPYW  Y+  AL HGL+ACWS P+  +  +VL
Sbjct: 90  GVEIGPEVGSCGTAAYTGQRVIVEDIEHHPYWALYKSFALVHGLRACWSEPIKDTQGKVL 149

Query: 246 GTFAVYFREPREPREEELRSIDRMLPITGIAIESARLVERLHERHRFFEMSQEIFCILDP 305
           GTFA+Y++E + P   +L  I     +  +AIE +R +E      + F+    +  ++  
Sbjct: 150 GTFAMYYKEIKSPTVADLTLIAEAARLASLAIERSRSLEFQRLAVKIFDRLP-LALVITN 208

Query: 306 HTERLVQFNPSLPRITGYGASELTSRSYREFLQPEEPRDGSDPMVVLGRSGEQVHEFVNR 365
            +  ++  N +   +      ++ + +  +F  P EP + +     L        E V  
Sbjct: 209 ASHSVLYANDAFKLMVCLQPDDILAFNPEQFFSPSEPHEIASLFNHLSEGKMWQGELVGL 268

Query: 366 CRCRDGSERLLEWV------SFAAPDGLLYAVARDITERRRVEAELAHASSHDPVSGLPQ 419
               +G    L+        S +A  G  +  + D++ER++    + + +++D ++GL  
Sbjct: 269 RN--NGETFYLDLTVTVFRESHSADLGFAWLFS-DVSERKKAAQLIKYQANNDSLTGLAN 325

Query: 420 HLLLGREVGDVLK-DSTEPVW-VLVIGLDRFQGVNESVGHLTGDDVLRQLAGRLQAALAG 477
              L R++ +++  DS  P +  +++ LD F+ VN++ GH  GD +L Q+  +++  L  
Sbjct: 326 RNALFRQIQELINADSLTPGFSFMLMDLDNFKQVNDTYGHDKGDVLLVQMVEQVKICLDP 385

Query: 478 QGRVARFAGDEFVVTATGLSADGALA-LAERLRAAVAEPLE-GGDYRLLLTASIGISHSP 535
           Q   AR  GDEF +   G+     L+ LA+++   V    E   D  +  + SIGI+  P
Sbjct: 386 QAVFARLGGDEFAILLPGVVTQRELSQLADKINKQVYRRYELSHDKGVYSSVSIGIARFP 445

Query: 536 DHGTDPNDLLRRAEAAMNQAKREGRDRVSMFSVEQMRDLEDRLVMGNQLRNAIRHDELEL 595
           +   D   LL  A+ AM  +K  GR+R   F+ +  ++ E    +   L+ A+  +  EL
Sbjct: 446 EDALDLEQLLNCADQAMYISKANGRNRYHFFTEQMQQNAERIANLHTLLKQALEQNAFEL 505

Query: 596 HYQPQYRAADRRLTGFEALLRWNSRQLGR-VPPARFIPIAEALGLMPEIGEWVLDAACRQ 654
           ++QP   A    +   E LLRW     G+ + P  FIPIAE  GL+  IG  V  A  + 
Sbjct: 506 YFQPIVDATTGLIVRAEVLLRWQHE--GQFISPDEFIPIAENSGLIVSIGRCVRQAVMQT 563

Query: 655 LRAWLDRGHRGFTVAVNVSAQQLQRHGL-------VAQVGAALQRHDVPPAMLDIEITES 707
           +      G    ++A+NVS  +   H L          +   L   D P  ++ +EITES
Sbjct: 564 IVEMQALGWP-MSLAINVSTFEFWSHELQDEFCDSFTDIIEGLGVEDFPYELITLEITES 622

Query: 708 SFMENVWRVQRTLAELKALGIRLSLDDFGTGYSSLAYLKQFPIDKLKIDQAFVRALPADT 767
             M+    + + L EL+A GI++SLDDFGTGYSSL+YL  FPID++KID++F+  L    
Sbjct: 623 LLMKKHAHLIQVLNELRARGIKISLDDFGTGYSSLSYLANFPIDQIKIDKSFIDRLAEGE 682

Query: 768 ADASIVRTIIAVAHELRMHVAAEGVETAAQADFLAAAGCDELQG 811
              +++  I+ ++H L + V AEGVET  Q   +      E+QG
Sbjct: 683 RHLALIEAIVRLSHALNLRVTAEGVETQEQLQVMMDNHIQEIQG 726



 Score = 30.8 bits (68), Expect = 3e-04
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 6/69 (8%)

Query: 99  SAD-GLTIYFRDITERKRAEQLAAGQ--HEILEGIAAQRPLVESLERIARLHETMNPGAL 155
           SAD G    F D++ERK+A QL   Q  ++ L G+A +  L   ++ +    +++ PG  
Sbjct: 289 SADLGFAWLFSDVSERKKAAQLIKYQANNDSLTGLANRNALFRQIQELINA-DSLTPG-- 345

Query: 156 CSLLLLDED 164
            S +L+D D
Sbjct: 346 FSFMLMDLD 354