Pairwise Alignments

Query, 252 a.a., RNA methyltransferase from Rhodanobacter denitrificans MT42

Subject, 241 a.a., RNA methyltransferase, TrmH family, group 1 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  171 bits (434), Expect = 1e-47
 Identities = 102/241 (42%), Positives = 142/241 (58%), Gaps = 4/241 (1%)

Query: 7   LTDRIRYVLVRTSHPGNIGSAARAIRTMGFTRLELVSPYRFPDPEANALAAGADDVLANA 66
           +   IR +LV TSHPGNIGS ARA++TMG + L L  P    D ++ ALAAGA D+L + 
Sbjct: 1   MLSNIRVILVGTSHPGNIGSTARAMKTMGLSTLYLAEPRCEVDGQSIALAAGASDILKHL 60

Query: 67  GIHADLVDGLAGSSLALGLSARRRGVNLPELSPREAVQQVLAAAARGEQVALVFGNERTG 126
                L + +A  SL +  SAR R ++ P L PREA Q+++     G  VA+VFG E  G
Sbjct: 61  VKVDSLQEAIADCSLVIATSARSRTLDWPMLEPREAGQKLVTEGITG-PVAIVFGRENHG 119

Query: 127 LENEELARCHAMVRIPSVDDFSSLNLSQAVQVMAYELRVAMLGDEPPAPPPEHDEPPADA 186
           L NEEL +C   V IP+  ++SSLNL+QAVQ++ YE RVA L       P   +E P  A
Sbjct: 120 LTNEELQQCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHLAQ--MEAPQAVEEYPLSA 177

Query: 187 VQMEQFYRHLAQTLDDIDFHKGREPTTIMLRLRKLFQRAQPDERELRVLHGILADAQRMA 246
             +E+F+ HL  TL    F     P  +M +LR++F RA+ + +E+ +L GIL    ++ 
Sbjct: 178 -DLERFFVHLESTLSSTGFIIKNHPGQVMTKLRRMFSRARIESQEMNILRGILTSIDKVV 236

Query: 247 G 247
           G
Sbjct: 237 G 237