Pairwise Alignments

Query, 118 a.a., transposase from Rhodanobacter denitrificans MT42

Subject, 96 a.a., ISSod1, transposase OrfA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 46.6 bits (109), Expect = 9e-11
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 12 YTDDFKATAVRLSQLPGVAVQDVAESLYIHPFMLSRWRKQAREGVIMTKGVAVDKAVAAE 71
          Y   FK  AV +    G +V D A+SL +   +L  W+++      + +G+ ++++   E
Sbjct: 10 YPQAFKDEAVLMVLEQGYSVADAAKSLGVSTSLLYNWKEKHEA---LQQGITLEESERDE 66

Query: 72 LKELRRVKKAYEQLKVEHDLLKKAIAF 98
          LK LRR  K   +L++E ++LKKA AF
Sbjct: 67 LKRLRRENK---ELRMEKEILKKASAF 90