Pairwise Alignments

Query, 196 a.a., RNA polymerase sigma factor from Ralstonia solanacearum GMI1000

Subject, 170 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 73.6 bits (179), Expect = 2e-18
 Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 9/156 (5%)

Query: 14  SLMTAFVDHYEELVDHVRHRFGDRAFARDVVQDVCVQLLHRPPAEPICTPLAFLRHLSIH 73
           ++ T + +H   L   +RH+ G    A D+ QD   ++L R   E +  P A+L  ++  
Sbjct: 11  AVATLYREHGGWLRSWLRHKLGCAESAADLAQDTFCRILRRENLEGLREPRAYLTTVAHG 70

Query: 74  RAIDRWRSDETYAAYAE----QAGQVAPDTDDVDGERVVASRQAVHQVEQAIGGLPARCR 129
             +D WR  E   AY E    Q   +AP  +    ER +   +A+ ++E  +  LP + R
Sbjct: 71  LVVDHWRRLEIERAYLEALAWQPEALAPSPE----ERALVL-EALLEIEALLAALPEKVR 125

Query: 130 EVFILHKLHDLSQDEVAVRLCISRNMVAKHLARAML 165
           + F+L +L  L   E+  RL +S  MV K++ARAML
Sbjct: 126 QAFLLAQLDGLGYQEIGERLGVSERMVKKYMARAML 161