Pairwise Alignments

Query, 637 a.a., sigma-54-dependent Fis family transcriptional regulator from Ralstonia solanacearum GMI1000

Subject, 582 a.a., GAF modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  319 bits (817), Expect = 2e-91
 Identities = 212/627 (33%), Positives = 316/627 (50%), Gaps = 49/627 (7%)

Query: 11  GQVLTLAQHDAPISGSLSGPAADPSIARSWLRCLHQHGLDPANASAPAVLEAARIRERRE 70
           G +  + + D  +SG   G   D  +  SW RC+  +GL+P    AP ++  A +R  RE
Sbjct: 2   GDLAHVTEIDRVVSGRAQGSLRDAVVTESWRRCVESYGLNPTATDAPHIVTDAELRAHRE 61

Query: 71  QLQPMLRIADGEMHSLHRQLAGNGHVVVLTDADGVILDCIADHAERALFRQAGLWSGADW 130
           Q + ++ +A   +  L +Q+AG+ +V++L DA GV +D   D       R AGL+ G++W
Sbjct: 62  QAERLIAVARSGLQGLFKQVAGHNYVLLLADAQGVCVDFFGDPRFEDELRSAGLYLGSNW 121

Query: 131 SEAREGTNGIGTCAVERQALTIYQDEHFRSRHIRLSCSASPVFDPQGNLLAVLDVSSIPR 190
            E   GT G+G+C V  +A+TI+QD+HF   H  LSC+A+P++D  G L AVLD+S +  
Sbjct: 122 QEELAGTCGVGSCIVTGEAVTIHQDDHFGLAHTPLSCTAAPIYDSLGQLSAVLDISLLRS 181

Query: 191 ELSRQGQFHTTALVNLSAKVIEGGYFLQHFERDWLLRFHAQPEYVGLFSEGLLAVGGDGR 250
              +  Q    +LV  SA+ +E    +    +DW+LRF   PE++ +  E  +++ G GR
Sbjct: 182 PTPKSSQNLAMSLVKASARRVEMANLMATARQDWVLRFSTSPEFLEVDPEAAVSLDGAGR 241

Query: 251 IRAANQSALNLLGRTRQ-SLLGQPVETVFDLTADALLARATDSGGVAWPLHTHQGRLLFG 309
           I     +A   LG T   +LLG  ++ + +++ D L             L    GR +FG
Sbjct: 242 ITGLTHAAQAALGATDPGALLGTRIDALMEMSIDDLPDLMRGRPTEERVLRLRDGRGVFG 301

Query: 310 LLRAPRPRPTADAAPASPPMPATPGLCLQADGLRTGFHRAL-RVFEHDVPLLLHGETGTG 368
              AP+  P      A P MPA        D + T   R L ++   +VPLLL GETGTG
Sbjct: 302 HAIAPQ-APRTPRPAAVPEMPAPLAGFAGPDPVLTPLLRRLGQLAGTEVPLLLLGETGTG 360

Query: 369 KEAFARAVHQASSRAAQPFVAVNCAAIPETLIESELFGYRGGSFTGARREGMRGKLQQAD 428
           KE  ARAVH  S  A + F  + CA +                         R  L +  
Sbjct: 361 KERLARAVH-LSGPAGRGFTVLRCAGLG------------------------RDPLPEPP 395

Query: 429 GGTLFLDEIGDMPLALQSRLLRVLEERAVVPIGGEAQTVDVRIVSASHRDMEARVRDGRF 488
            GTLFL  + D+  A Q  +L +LE R            D+R ++++  D+ A V+ G F
Sbjct: 396 AGTLFLRGVEDLDTAGQGAVLALLEARP-----------DLRAIASARTDISAAVKAGAF 444

Query: 489 REDLYYRLNGLRITLPPLRERADKAALLAHVLAEESRGRPARLDDDARDALLAQPWPGNV 548
           R DL++RL G    LPPLR R D   LL  ++      R   L   AR  L A+ WPGN+
Sbjct: 445 RSDLFFRLAGHVAHLPPLRLRHDLEWLLTRLMRRHV-ARDLSLSPAARAELSARNWPGNI 503

Query: 549 RQLRNVLRTLVALSDDGRIRLRDLPPELRPPAMASAAAPAPLDNAEKAALLAALQAQQWR 608
           R+L++ L    AL++   I L DLP     P++  AAA  P     +A L + L A  W 
Sbjct: 504 RELQSTLDVAAALAEGRVIDLPDLP----GPSLPEAAAAPP-----EADLQSLLDACGWN 554

Query: 609 MTHAAKALGISRNTLYRKLRKHGIARP 635
           M+ AA+ LG++R+T+ R++RK G+  P
Sbjct: 555 MSQAARRLGVNRSTVLRRVRKAGLTPP 581