Pairwise Alignments

Query, 200 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Ralstonia solanacearum GMI1000

Subject, 168 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD from Acidovorax sp. GW101-3H11

 Score =  177 bits (448), Expect = 1e-49
 Identities = 89/165 (53%), Positives = 106/165 (64%), Gaps = 1/165 (0%)

Query: 36  IDLIVLHNISLPPARFGTDDVLDFFANTLDCGAHPYFEQLRGVRVSAHFFIRRTGACVQF 95
           +DLIV+H+ISLPP  FGT  V   F NTLD  AHPY++ +RG++VSAHFFI R G   QF
Sbjct: 1   VDLIVVHSISLPPGEFGTGAVQQLFTNTLDWDAHPYYQGIRGLQVSAHFFIDRLGVPWQF 60

Query: 96  APCDARAWHAGVSDFFGRTRCNDFSIGIEIEGTDDQPFTPAQYAATAALVRAICAAYPIR 155
             CD RAWHAG S + GR +CND SIGIE+EG +   F P QY   A L + I   YPI 
Sbjct: 61  VDCDLRAWHAGQSFYRGRAQCNDDSIGIELEGLEGLGFEPPQYQTLARLCQDIALRYPIA 120

Query: 156 AIAGHSDIAPGRKTDPGPCFDWAHLRRLAKLEAALFPYQAGAAPA 200
            +AGH  IAPGRK DPGP FDW  L++        FP +A   PA
Sbjct: 121 HVAGHEHIAPGRKQDPGPGFDWTALQKELGWPRHQFP-EAAQPPA 164