Pairwise Alignments

Query, 200 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Ralstonia solanacearum GMI1000

Subject, 184 a.a., N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) from Shewanella loihica PV-4

 Score =  167 bits (422), Expect = 1e-46
 Identities = 87/171 (50%), Positives = 104/171 (60%), Gaps = 4/171 (2%)

Query: 14  GWADGVCRHPSPNVDARPEGLPIDLIVLHNISLPPARFGTDDVLDFFANTLDCGAHPYFE 73
           GW     +  SP+ +ARP+   + L+V+HNISLP  +FG   +   F   LD  A   F 
Sbjct: 9   GWIRECRQCVSPHFNARPDD-EVSLLVIHNISLPAGQFGLPYIDQLFQGCLDIQADESFC 67

Query: 74  QLRGVRVSAHFFIRRTGACVQFAPCDARAWHAGVSDFFGRTRCNDFSIGIEIEGTDDQPF 133
            L+G+ VSAHF IRR G  VQ+  CD RAWHAGVS F GRT CNDF+IGIE+EGTD   +
Sbjct: 68  DLQGLEVSAHFLIRRDGELVQYVSCDDRAWHAGVSSFAGRTGCNDFAIGIELEGTDSLAY 127

Query: 134 TPAQYAATAALVRAICAAYPI---RAIAGHSDIAPGRKTDPGPCFDWAHLR 181
           T  QY     L   +  AYP+     I GHSDIAPGRKTDPG  FDW   R
Sbjct: 128 TDEQYERLTQLTLVLFDAYPMLNRNLIVGHSDIAPGRKTDPGESFDWHRYR 178