Pairwise Alignments

Query, 311 a.a., branched-chain amino acid ABC transporter permease from Ralstonia solanacearum GMI1000

Subject, 301 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  264 bits (675), Expect = 2e-75
 Identities = 150/312 (48%), Positives = 203/312 (65%), Gaps = 14/312 (4%)

Query: 1   MDIFIQQIVNGLVLGSIYALIALGYTMVYGILGIINFAHGDVLMIGAMSALTAIN-FLQK 59
           M+ F QQ+ NGL +G IYALIALGYTMVYG+L +INFAHGD+  IGA    T    F   
Sbjct: 1   MEEFFQQLTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGFTLFTAFGLS 60

Query: 60  FFPNLPDWLTLVLALLFAMPVCAVVAYTIERVAYRPLRNAPRLAPLITAIGVSIVLQTLA 119
            F + P  + LVL ++  M + A++ + +ERVAYRPLR++ RL+ +++A+G SI  Q   
Sbjct: 61  GFVSGPGGVLLVLVMV--MGLVALIGFLLERVAYRPLRSSSRLSAVVSALGASIFFQNAV 118

Query: 120 MMIWSRNPLTFPQ-LLPSSPIDIGSTGATITGKEIAIILVSLAVMTGLTLLVNRTKLGRA 178
           M+I+      +P  + PS  + I   G  +    I +I  SL +M  L     RT++G A
Sbjct: 119 MLIYGAKFQVYPNDIRPSYVLSI--MGIDVPLVRIMMIAASLGLMLALYWFTQRTRIGAA 176

Query: 179 MRATAENQRVAGLMGVNPNFVISATFMIGAAMAAVAGVMMATNYGNAHFYMGFIPGLKAF 238
           +RATA +Q  A LMG++ N VIS  FMIG A+  VAGVM+   YG   F MG++ GLKAF
Sbjct: 177 IRATAIDQGAAKLMGIDVNRVISLVFMIGPALGGVAGVMVGLYYGQVDFTMGWVYGLKAF 236

Query: 239 TAAVLGGIGNLAGAMVGGVLLGLIEALGAGYIGDLTGGVFGSNYQDVFAFIVLICVLLFR 298
           TAA+LGGIGN+ GAMVGG+LLG+IEALGA YI           ++D  AF+VLI +L+ R
Sbjct: 237 TAAILGGIGNIPGAMVGGLLLGVIEALGAAYI--------SIAWKDAIAFLVLILILIIR 288

Query: 299 PSGIMGERVADR 310
           P+G++GERVAD+
Sbjct: 289 PTGLLGERVADK 300