Pairwise Alignments

Query, 636 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Ralstonia solanacearum GMI1000

Subject, 647 a.a., 1-deoxy-D-xylulose 5-phosphate synthase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  509 bits (1310), Expect = e-148
 Identities = 286/641 (44%), Positives = 402/641 (62%), Gaps = 25/641 (3%)

Query: 3   YELLNTIDAPAELRRLDRRQLGTLADELRAFVLESVAQTGGHLSSNLGTVELTIALHYVF 62
           Y LLN+I++P +LRRL+  QL  + DELR  +++ ++   GH +++LGTVELT+ALHYV+
Sbjct: 7   YNLLNSINSPDDLRRLEVDQLPEVCDELRQDIIKELSCNPGHFAASLGTVELTVALHYVY 66

Query: 63  NTPDDRIVWDVGHQSYPHKILTGRREQMATLRQLDGISGFPRRSESPYDTFGTAHSSTSI 122
           NTP DRIVWDVGHQ+Y HKILTGRRE  +T R+L GI  FP   ES YDTF   H+S SI
Sbjct: 67  NTPYDRIVWDVGHQAYGHKILTGRREAFSTNRKLGGIRPFPSPEESEYDTFTCGHASNSI 126

Query: 123 SAALGMALGAKTQGEN-RVAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDNDMSI 181
           SAALGMA+ A  +G++ R  IA+IGDG+MS G+AFE +NN+    N  L+++LNDNDM+I
Sbjct: 127 SAALGMAVAAAKKGDDQRHVIAIIGDGSMSGGLAFEGLNNSSTTPN-NLLIILNDNDMAI 185

Query: 182 SPPVGALNRYLARLMSGQFYAATKKGVEKLLSVAPPVLEFAK----RFEEHAKGMLVPA- 236
              VG + +YL  L +   Y   +    +LL     + +  +    RF    K M     
Sbjct: 186 DRSVGGMKQYLFNLTTSNRYNQLRFKASRLLFKLGILNDERRKALIRFGNSLKSMAAQQQ 245

Query: 237 TMFEEFGFNYIGPIDGHDLESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPI 296
            +FE     Y GPIDGHD+++L   L++I+   L+G  P+ LH+ T KG+G+  AE    
Sbjct: 246 NIFEGMNIRYFGPIDGHDIKNLSRVLRDIKD--LKG--PKILHLHTIKGKGFAPAEKHAT 301

Query: 297 LYHGPGKFNPQEGIKPAARPAKVS--YTQVFGQWLCDMAAADKRLVGITPAMREGSGMVE 354
            +H PGKF+P  G +  A    +   +  VFG  L ++A A+ R+VG+TPAM  G  M  
Sbjct: 302 EWHAPGKFDPVTGERFVANTEGMPPLFQDVFGNTLVELAEANPRIVGVTPAMPSGCSMNI 361

Query: 355 FEQRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPV 414
              + P R +DVGIAE HAVTF+GG+A +GL+P   IYS+F+QR YD +IHDVA+QNLPV
Sbjct: 362 LMSKMPKRAFDVGIAEGHAVTFSGGMAKDGLQPFCNIYSSFMQRAYDNIIHDVAIQNLPV 421

Query: 415 VFALDRAGLVGADGATHAGAYDMAYLRCIPNMMVMAPADENECRQLLSTAFAQD-CPTAV 473
           V  LDRAGLVG DG TH GA+DMAYLR IPN+ + +P +E+E R+L+ TA   D  P  +
Sbjct: 422 VLCLDRAGLVGEDGPTHHGAFDMAYLRPIPNLTIASPMNEHELRRLMYTAQLPDKGPFVL 481

Query: 474 RYPRGAGTGVVVQPTLEPLPVGKAEVRRASTAPAGQRVVILAFGSMVAPAAAAAERLDA- 532
           RYPRG G  V  +  LE +PVGK    +      G+ + +++ G +   A +A  R ++ 
Sbjct: 482 RYPRGRGVLVDWKCPLEEIPVGKGRKLK-----DGKDIAVISIGPIGNKARSAIARAESE 536

Query: 533 -----TVVNMRFVKPLDAACVLEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGVATPV 587
                   ++RF+KPLD   + E+ RT  ++VT+E+G + GG GSA LE +A       V
Sbjct: 537 SGRSIAHYDLRFLKPLDEELLHEVGRTFRHIVTIEDGTIQGGMGSAVLEFMADHEYTPTV 596

Query: 588 LQLGLPDRFVDHGDHAALLALCGLDANGILASIRERFAVQP 628
            ++G+PD+FV HG  A L  LCG+D + +   + ++  + P
Sbjct: 597 KRIGIPDKFVQHGTVAELYQLCGMDEDSLTKELLKQCELLP 637