Pairwise Alignments

Query, 863 a.a., ribonuclease R from Ralstonia solanacearum GMI1000

Subject, 1037 a.a., ribonuclease R (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  392 bits (1006), Expect = e-113
 Identities = 256/747 (34%), Positives = 381/747 (51%), Gaps = 49/747 (6%)

Query: 3   QPTYPIPSREEILGVLRTSGSPLSAADIAKALSVTRKEHDGFIKRLTAMERDGQLELNRK 62
           + +Y +P   ++  + R +  PL    + + L + R+       RL  + R G++   R 
Sbjct: 7   EESYVLPDANDLATLFREAHRPLKIDALMRMLGLHRRMKKELEDRLDDLVRQGRIIRLRG 66

Query: 63  GRYELAHQPNFIEGRVVGHRDGYGFFIRDD-GEPDIFLPEREMQKAMHGDRALVRVIGYD 121
           G + L  Q   + G +   R G GF + ++ G  DI++   +M  A HGD+ +V ++   
Sbjct: 67  GAWGLVEQLRLVTGTLSIQRSGMGFVLPEEKGRDDIYVHPYQMGDAWHGDKVVVALLPGR 126

Query: 122 RRGRSEGQIVEMLERANRYVIGRLLSESG--TLVVAPEDKRLGRDILIAPKG-QGKAKVG 178
                EG+IV +LER  + +  R++   G  +L+  P D R+    ++     + KA+ G
Sbjct: 127 HGKNPEGRIVRVLERGRKEIPARVVRRMGRHSLLCRPADPRMAVSFVVDMSAVEEKAEKG 186

Query: 179 QVVSVEILEYPDRYVQP---IGRVVEVLGEIDDPGMEIEIAVRKYGVPHEFSEATLRESE 235
            +V    +  P   V+        + VLG  D+  ++  +    + VP +F    L E+ 
Sbjct: 187 DLV----VAAPGEKVEDGLWAATGLAVLGADDNVLVQERLVKINHDVPGDFPPEVLEEAR 242

Query: 236 ALPDVVRESDLAGRIDLRDVPLVTIDGEDARDFDDAVYCEPVKIGRSKGWRLVVAIADVS 295
            LP V    D+ GRIDLR +  VTIDG  ARDFDDAVY E     +  G+RL VAIADV+
Sbjct: 243 DLPAVPGRDDMEGRIDLRHLEFVTIDGAKARDFDDAVYVEE----QGTGYRLWVAIADVA 298

Query: 296 HYVQPGKSLDVDAIDRATSVYFPRRVIPMLPEKLSNGLCSLNPEVDRLCMVCDAVITAKG 355
           HYV+PG ++D +A  R+ S YFP+ V PMLPE LSNGLCSLNP V RL MV +    A G
Sbjct: 299 HYVRPGSAMDREAQARSNSYYFPQSVEPMLPEALSNGLCSLNPRVPRLAMVAETFFYADG 358

Query: 356 QIKAYQFYPAVMHSAARLTYNEVWSILSNVKGPEAAKRAPLVPHLQDLYELFQVLLKARR 415
                +FY A++ S ARLTY +V   +      E     P++P L+    L ++L   R 
Sbjct: 359 TPGRSKFYAAIIESKARLTYGQVNRAIIEKDEKERRLLTPVLPLLERAEALARLLNAKRS 418

Query: 416 ERGAIDFDTTETYIVCNAQGKIEQILPRTRNDAHRLIEECMLTANVCAAEMLERYKHPAL 475
           ERG++DFD  E  ++ N  G+   I  + R+  H++IEE M+ AN   A  L       L
Sbjct: 419 ERGSLDFDLPEPEVIFNIYGETVDIGRKVRHFGHQIIEEFMIAANEAVARFLTEKNARFL 478

Query: 476 YRVHAGPTEEKLQALRAFLKTSGLTLGGGDKPQAADYAELMEKIIARPDAPMLQTMLLRS 535
           YRVH  P  EKL+ L   L  + L      K  A     +++         ++  M LR+
Sbjct: 479 YRVHPEPDTEKLEGLFKVLGRTSLAQHLPGKASAKALQGVLQAAKGSDQEFLVNRMALRT 538

Query: 536 MQQAVYSPDNVGHFGLAYEAYAHFTSPIRRYPDLLVHRAIKAVLQHSRYVPALASGVQLN 595
           M QA Y+PD+ GHFGLA E Y HFTSPIRRY DL+VHRA++  L           G+ +N
Sbjct: 539 MMQARYAPDHEGHFGLASECYCHFTSPIRRYADLVVHRALRRTL-----------GLPVN 587

Query: 596 SGLSPKARRMQAEADKATPAAVASKAKVEAIWHELGVHCSANERRADEASRDVEAWLKCY 655
             L P  R +   AD                        + NER A EA R++   +   
Sbjct: 588 GPL-PGERALLTIADT----------------------LNTNERVAMEAEREILKRITVL 624

Query: 656 FMRDKLGNEFSGTVSAVTSFGIFVQLDELYVEGLVHVTELGSDYFQFDEARNELRGERTG 715
           F+ +++G EF+G +S +  FG FV+ +E+  EG+V ++ L  DY+ +   R EL GERTG
Sbjct: 625 FLSERVGEEFTGVISGIIDFGFFVEFNEVMAEGMVRLSSLDDDYYGYLPERQELVGERTG 684

Query: 716 IRYRLTDRVRVQLLRVDLDARKMDFRL 742
             +RL   V V+L  V++   +++  L
Sbjct: 685 RSFRLGQTVTVRLAEVNVARLEVNLAL 711