Pairwise Alignments

Query, 863 a.a., ribonuclease R from Ralstonia solanacearum GMI1000

Subject, 751 a.a., ribonuclease R (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  376 bits (965), Expect = e-108
 Identities = 270/737 (36%), Positives = 377/737 (51%), Gaps = 64/737 (8%)

Query: 9   PSREEILGVLRTSGSPLSAADIAKALSVTRKEHDGFIKRLTAMERDGQLELNRKGRYELA 68
           P+++E+L  +  + +  +  +IA+A  +         + L  +E  G LE  RK  Y   
Sbjct: 5   PTKDEVLAWIEDNPARANKREIARAFGIKGAARIDLKRLLKELEGKGHLE-KRKRSYRDP 63

Query: 69  HQPNFIEGRVVGHRDGYG-FFIRD------DGEPDIFLPEREMQKAM-HGDRALVRVIGY 120
                +    VG  DG G  F R         EP   +  R+   A+  GDR L R+   
Sbjct: 64  ESLPPVSVLKVGDADGDGDLFARPLDWQGAGAEPACLIIPRKGDPALAEGDRILARLTRV 123

Query: 121 DRRGRS-EGQIVEMLERANRYVIG--RLLSESGTLVVAPEDKRLGRDILIAPKGQGKAKV 177
           +    + E +++  +    R ++G  R  +E G +V  P DK   R+  +A  G   A+ 
Sbjct: 124 EGEDYAYEARLIRRIGTGPRKILGILRKTAEGGRIV--PIDKGADREWRVAQGGLLGAQD 181

Query: 178 GQVVSVEILEYPDRYVQPIGRVVEVLGEIDDPGMEIEIAVRKYGVPHEFSEATLRESEAL 237
           G +V  E      R   P+ RV +VLG+         IA+ ++G+  EF EA L E+EA 
Sbjct: 182 GDLVEAEQAGPKGRMGLPLARVTQVLGDPGGAKSVSLIAIHQHGILDEFPEAALAEAEA- 240

Query: 238 PDVVRESDLAGRIDLRDVPLVTIDGEDARDFDDAVYC----EPVKIGRSKGWRLVVAIAD 293
              V   +L  R DLRD+PL+TID  DARD DDAV      +P   G   G+ L VAIAD
Sbjct: 241 ---VTAPELGARTDLRDLPLITIDPPDARDRDDAVCAIPDDDPANPG---GFVLWVAIAD 294

Query: 294 VSHYVQPGKSLDVDAIDRATSVYFPRRVIPMLPEKLSNGLCSLNPEVDRLCMVCDAVITA 353
           V+  V+PG +LD +A  R  S YFP RV+PMLP+ LS  LCSL+ +VDR CM    VI A
Sbjct: 295 VAAAVRPGGALDREARKRGNSTYFPDRVVPMLPDSLSGDLCSLHEDVDRACMAVRMVIDA 354

Query: 354 KGQIKAYQFYPAVMHSAARLTYNEVWSILSNVKGPEAAKRAPLV-PHLQDLYELFQVLLK 412
           +G  +   F+  +M S A L Y EV +    V G    +  PL+ P L+ L+  ++ L  
Sbjct: 355 EGTKRGQTFHRGLMRSRASLAYGEVQAA---VDGDPTERTEPLLEPILRPLFAAYEALKA 411

Query: 413 ARRERGAIDFDTTETYIVCNAQGKIEQILPRTRNDAHRLIEECMLTANVCAAEMLERYKH 472
           AR  R  +D D  E  I  +  G++  +  R R + HRLIEE M+ ANV AAE L + + 
Sbjct: 412 ARARRQPLDLDLPERRIALSETGEVTSVAFRDRLEVHRLIEEFMVLANVAAAETLAKKRT 471

Query: 473 PALYRVHAGPTEEKLQALRAFLKTSGLTLGGGDKPQAADYAELMEKIIARPDAPMLQTML 532
           P LYRVH  P E KL ALR  ++ +GLTL  G   + AD   L+ +     DA ++    
Sbjct: 472 PLLYRVHEEPAETKLDALRETVQAAGLTLAKGRVLRTADLNRLLAQAAGTDDAELINIST 531

Query: 533 LRSMQQAVYSPDNVGHFGLAYEAYAHFTSPIRRYPDLLVHRAIKAVLQHSRYVPALASGV 592
           LRSM QA YSP+N GHFGLA + YAHFTSPIRRY DL+VHRA+         + A   G 
Sbjct: 532 LRSMTQAYYSPENFGHFGLALQNYAHFTSPIRRYADLIVHRAL---------ITAHGFG- 581

Query: 593 QLNSGLSPKARRMQAEADKATPAAVASKAKVEAIWHELGVHCSANERRADEASRD-VEAW 651
               GL                    S+A +E +  E G   S  ERR+  A RD ++ +
Sbjct: 582 --EDGL--------------------SEADIERL-DETGKLISEAERRSMAAERDTIDRY 618

Query: 652 LKCYFMRDKLGNEFSGTVSAVTSFGIFVQLDELYVEGLVHVTELGSDYFQFDEARNELRG 711
           L  Y + D++GNEFS  +S V  FG F +LDE   +GL+ +  +G+++F FD     L G
Sbjct: 619 LAAY-LADRVGNEFSARISGVARFGAFARLDETGADGLIPIRTIGAEFFHFDADAQALVG 677

Query: 712 ERTGIRYRLTDRVRVQL 728
             TG R  +  RV V+L
Sbjct: 678 SDTGFRLAMGQRVTVRL 694