Pairwise Alignments

Query, 447 a.a., ribosome biogenesis GTPase Der from Ralstonia solanacearum GMI1000

Subject, 488 a.a., GTP-binding protein EngA (RefSeq) from Shewanella amazonensis SB2B

 Score =  439 bits (1128), Expect = e-127
 Identities = 219/467 (46%), Positives = 315/467 (67%), Gaps = 21/467 (4%)

Query: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60
           M PV+ALVGRPNVGKSTLFNRLTR+RDALVAD PGLTRDR YG   +    FI +DTGG 
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60

Query: 61  EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
           +   +EGI  +MA+Q+  A+ EADVV+F+ D R GL   D  IA +LR   +   +  NK
Sbjct: 61  DGT-EEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANK 119

Query: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRELVDEAL---------------DLAFA 165
            +G+   +   +F++LGLG+   +++A G GV  LV+ AL               ++   
Sbjct: 120 VDGIDADSACGEFWQLGLGEVYQMAAAQGRGVTGLVEYALAPFAEAMGLVRDDDGEVVTD 179

Query: 166 ERPELAEAAEGH-----DHGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIY 220
           ER    E AE       +   ++AI+G+PNVGKSTL N ++GEERV+ +D PGTTRD++Y
Sbjct: 180 ERNYTEEEAEAEQQRLAEQPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVY 239

Query: 221 VDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQD 280
           +  ER+G+ Y LIDTAG+R+R +V E IEKFSV+KTL+++ D+NVV+L++DA + I++QD
Sbjct: 240 IPMERDGRNYVLIDTAGVRRRARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQD 299

Query: 281 AHIAGFIVESGRALVIGVNKWDGLDGHARDRIKHDMERKLQFLSFANVHYISAKQRTGIG 340
             + GF++ SGRALV+ VNKWDGLD   +DR+K +++R+L F+ FA +H+ISA   TG+G
Sbjct: 300 LGLLGFVLNSGRALVLAVNKWDGLDQDVKDRVKTELDRRLGFIDFARIHFISALHGTGVG 359

Query: 341 ALMKSVDDAYAAAMVKLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVI 400
            L +S+++AY +A  ++ T  LTR++Q A +  QP      R KL+YAH GG NPPIVV+
Sbjct: 360 HLFESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPMVNGRRVKLKYAHVGGYNPPIVVV 419

Query: 401 HGNALSNIPETYRRFLEGRFRDAFQLKGTPLRIEFRTNKNPYAQSNE 447
           HGN +S +P++Y+R++   +R A ++ GTP+++ F    NP+    E
Sbjct: 420 HGNQVSRLPDSYKRYMMNYYRRALKVVGTPIQLRFHEGDNPFEGRKE 466