Pairwise Alignments

Query, 500 a.a., tripartite tricarboxylate transporter permease from Ralstonia solanacearum GMI1000

Subject, 505 a.a., putative integral membrane protein from Phaeobacter inhibens DSM 17395

 Score =  372 bits (955), Expect = e-107
 Identities = 195/487 (40%), Positives = 304/487 (62%), Gaps = 7/487 (1%)

Query: 3   LLANLALGFSTALSLQNLVYAFIGCVLGTLIGVLPGLGPIATIAMLLPVTYTL-PPAAAL 61
           +L  + +G STA S  N++    GC++GT IG+LPGLGP++ I++++PV  ++  P+AAL
Sbjct: 1   MLDGILIGLSTAFSFSNILMVIGGCLIGTFIGMLPGLGPMSIISIMIPVAISIGDPSAAL 60

Query: 62  IMLAGIYYGAQYGGSTTAILVNLPGESSSVVTTIDGYQMARRGRAGVALATAGLGSFFAG 121
           I+LAG+YYGA +GGST++IL+N PG +S+V T+ DGY +AR+G+AG AL  A + SF  G
Sbjct: 61  ILLAGVYYGAIFGGSTSSILINAPGVASTVATSFDGYPLARQGKAGKALTVAAISSFCGG 120

Query: 122 CVATLVLAAFATPLSEFAFRFGPAEYFSLMVLGLIGAVVLA-SGSLLKAIAMIVFGLLLG 180
            +  ++L  FA  L+  A  F  AEYF+LMV+GL      A +G ++KA+ M V GL++ 
Sbjct: 121 SIGAVLLMIFAPALASVALLFHSAEYFALMVVGLSAIAAFAGTGQVVKALLMTVLGLIMA 180

Query: 181 LVGTDVNSGAARYAFDVPELADGLNFVSVAMGVFGFAEIIINL--EQKEHRETFVDHVRN 238
            VG        R+   + +L  G  F+++AM +F   E +  +    +   E   + +++
Sbjct: 181 TVGEGALFNMPRFTMGIMDLQSGFGFITLAMAMFALPEALYLVLDPSRSKTEGGSNEIKD 240

Query: 239 LWPSREDFRRMVPSVLRGTALGSLLGILPGGGATLASFASYSLEKKAS--RYAHEFGKGA 296
           L  +R + + + P + R +  G L+G+LPG GAT+ASF  Y++E+  +      EFGKGA
Sbjct: 241 LRITRAEAKSIAPVIGRQSIQGFLIGVLPGAGATIASFLGYAVERNIAPKEEQKEFGKGA 300

Query: 297 IEGVAGPESANNAAAQTSFIPLLTLGIPSNAVMALMVSAMTMHDIQPGPQVVTSNPALFW 356
           I+G+A PESANNAA   SF+PLLTLGIP +   A+++ A+   ++ PGP+++   P +FW
Sbjct: 301 IKGLAAPESANNAACTGSFVPLLTLGIPGSGTTAILLGALIALNVSPGPRLMVDEPEIFW 360

Query: 357 GLIASMWIGNLMLIVLNLPMIGLWVRLLKVPYRFLYPAILVFCCIGVYSVSNTTFDVFQT 416
            +I SM++GNL+L+VLNLP+I    ++L VP  +L P I  F  +G Y   N   ++   
Sbjct: 361 AVIISMYVGNLILLVLNLPLIPYIAKVLAVPRNYLIPFIFFFTLMGAYIGQNNATELLIL 420

Query: 417 AVFGLLGYLFVKLRCEPAPMLLGFVLGPLMEENFRRAMQFSRGDFSIFVTRPLSLGLLIG 476
              G+   +        AP+L+GF+LG ++E+NF R+MQ   G     + RP+++GLL  
Sbjct: 421 VGLGICATVLRFADYPLAPLLIGFILGSMLEDNFSRSMQLYDG-LGFLMERPMTIGLLGL 479

Query: 477 AAALVLL 483
           AA LV+L
Sbjct: 480 AALLVIL 486