Pairwise Alignments

Query, 500 a.a., tripartite tricarboxylate transporter permease from Ralstonia solanacearum GMI1000

Subject, 503 a.a., protein of unknown function DUF112 transmembrane (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  291 bits (745), Expect = 4e-83
 Identities = 165/493 (33%), Positives = 269/493 (54%), Gaps = 7/493 (1%)

Query: 9   LGFSTALSLQNLVYAFIGCVLGTLIGVLPGLGPIATIAMLLPVTYTLPPAAALIMLAGIY 68
           LG +  LSL  L     G + G +   +PG      I + LP+T+T+ P   + ++  +Y
Sbjct: 6   LGAAEVLSLTTLAMMLAGAIAGIIAAAIPGFTVTMAIVLTLPLTFTMDPLQGISVMLSVY 65

Query: 69  YGAQYGGSTTAILVNLPGESSSVVTTIDGYQMARRGRAGVALATAGLGSFFAGCVATLVL 128
            G   GG  +A L+ +PG  SSV TT D + MAR G  G AL+     SFF   ++T VL
Sbjct: 66  VGGYTGGLISAALLGIPGTPSSVATTFDAFPMARGGEPGRALSLGVWASFFGTVISTAVL 125

Query: 129 AAFATPLSEFAFRFGPAEYFSLMVLGLIGAVVLASGSLLKAIAMIVFGLLLGLVGTDVNS 188
              A PL+ FA R GP EYFSL+V  L     L   SL + +   + GL +  +G D   
Sbjct: 126 IVAAPPLAVFAVRLGPWEYFSLIVFALTIVASLVGNSLQRGLIAALIGLAISTIGADPIM 185

Query: 189 GAARYAFDVPELADGLNFVSVAMGVFGFAEIIINLEQKE---HRETFVDHVRNL--WPSR 243
           G  R+      L  GL F+ V +G+F  +++   +E  +     E  VD   +   W   
Sbjct: 186 GRPRFDMGWELLRAGLPFLVVLIGIFAISQLASEVEDAKAIKRGEKLVDGDIDFKTWSVM 245

Query: 244 EDFRRMVPSVLRGTALGSLLGILPGGGATLASFASYSLEKKASRYAHEFGKGAIEGVAGP 303
            +      +++R + +G  +G LPG G ++A+  +Y   K+AS+    FG G  +G+   
Sbjct: 246 REVLSRPVNLVRSSMVGVAIGALPGAGGSIANLVAYDQAKRASKTPEAFGTGTPDGIVAS 305

Query: 304 ESANNAAAQTSFIPLLTLGIPSNAVMALMVSAMTMHDIQPGPQVVTSNPALFWGLIASMW 363
           ES N+A A    IPL++LGIP +AV A++++++ +H I  GP+++  N  L +G+  +M 
Sbjct: 306 ESGNSATAGGGLIPLISLGIPGSAVDAILMASLMVHGISVGPRLIMDNADLVYGMFIAMA 365

Query: 364 IGNLMLIVLNLPMIGLWVRLLKVPYRFLYPAILVFCCIGVYSVSNTTFDVFQTAVFGLLG 423
           + +LM++V+ +  +  ++R+ +VP   + P +LV C +G ++++N   D++  A  GL+G
Sbjct: 366 VSSLMMLVVCVVSMRAFLRVAEVPKWVVVPVVLVCCVVGSFALNNRVTDLYLLAAIGLVG 425

Query: 424 YLFVKLRCEPAPMLLGFVLGPLMEENFRRAMQFSRGDFSIFVTRPLSLGLLIGAAALVLL 483
           Y    L    AP++LG +LGP+ E N RRA+  +  D+++F+TRP+SL  L+ AA L + 
Sbjct: 426 YALKALDYPLAPLVLGVILGPIAETNLRRAL-MTDADWTLFLTRPVSLIFLV-AAVLSVA 483

Query: 484 VAMPAIGRKREQA 496
            A+  I + R QA
Sbjct: 484 WAIRGILKARNQA 496