Pairwise Alignments

Query, 500 a.a., tripartite tricarboxylate transporter permease from Ralstonia solanacearum GMI1000

Subject, 504 a.a., protein of unknown function DUF112 transmembrane (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  377 bits (967), Expect = e-109
 Identities = 196/487 (40%), Positives = 297/487 (60%), Gaps = 4/487 (0%)

Query: 1   MDLLANLALGFSTALSLQNLVYAFIGCVLGTLIGVLPGLGPIATIAMLLPVTYTLPPAAA 60
           MD+   LA GF+T+LS  N+    IG  +G  IG +PGLG +  +A++LP+T+ +PPA+A
Sbjct: 1   MDIFPLLAEGFATSLSPLNIFIVLIGVTVGLFIGAMPGLGSVNGVAIVLPLTFVVPPASA 60

Query: 61  LIMLAGIYYGAQYGGSTTAILVNLPGESSSVVTTIDGYQMARRGRAGVALATAGLGSFFA 120
           +I+L  IYYGA YGG+ ++IL+ +PG S++V TT DG  MA++G AG+AL  A + SF  
Sbjct: 61  IILLCAIYYGAMYGGAVSSILLGIPGASTAVATTFDGRPMAQKGEAGLALIAAAVASFIG 120

Query: 121 GCVATLVLAAFATPLSEFAFRFGPAEYFSLMVLGLIGAVVLASGSLLKAIAMIVFGLLLG 180
           G ++ ++  AFA PL++ A  FGPAE F+L++L     V L     LK I MI  GL+L 
Sbjct: 121 GTISVILFTAFAIPLADLALAFGPAEEFALVLLAFTTFVGLGGDDALKTIVMICLGLVLS 180

Query: 181 LVGTDVNSGAARYAF-DVPELADGLNFVSVAMGVFGFAEIIINLEQKEHRETFVDHVRNL 239
            VG D+ SG  R  F D+P    G++F+ +A+GV+G  EI+  +E  +   T        
Sbjct: 181 TVGLDLISGQPRLIFGDLPGFYSGISFLVLAIGVYGIGEILYTIETSKKSPTVTAAKITF 240

Query: 240 WPSREDFRRMVP---SVLRGTALGSLLGILPGGGATLASFASYSLEKKASRYAHEFGKGA 296
                  RRM     ++  G+ LG  +G+LP  GAT A+  +Y + +  S+ +  FGKG 
Sbjct: 241 SELGAGLRRMNKLWKTMSMGSFLGFFVGMLPAAGATPAALMAYGIARTTSKKSENFGKGE 300

Query: 297 IEGVAGPESANNAAAQTSFIPLLTLGIPSNAVMALMVSAMTMHDIQPGPQVVTSNPALFW 356
           IEGVA PE+ANNAA+  S +P+LTLGIP +   AL++  M M  + PGP +    P   W
Sbjct: 301 IEGVAAPETANNAASTGSLLPMLTLGIPGSPTTALLLGGMVMWGLVPGPMLFIEQPDFVW 360

Query: 357 GLIASMWIGNLMLIVLNLPMIGLWVRLLKVPYRFLYPAILVFCCIGVYSVSNTTFDVFQT 416
           G+I+S++  N+  +++NL +I L+V  L++P+  L   ++V C +G ++ S    DV+  
Sbjct: 361 GMISSLYTANVAAVLINLALIPLFVWALRMPFTVLCSVVVVLCIVGGFAPSQKIHDVWLI 420

Query: 417 AVFGLLGYLFVKLRCEPAPMLLGFVLGPLMEENFRRAMQFSRGDFSIFVTRPLSLGLLIG 476
           A FG+LGY+  K     AP++L  VLGPLME++FR+++   +G+  +FV RPLS   ++ 
Sbjct: 421 AAFGILGYILRKADYPLAPLVLALVLGPLMEKSFRQSLVMEQGNVFVFVERPLSATFMVL 480

Query: 477 AAALVLL 483
           A    LL
Sbjct: 481 ALIFFLL 487