Pairwise Alignments

Query, 765 a.a., outer membrane protein assembly factor BamA from Ralstonia solanacearum IBSBF1503

Subject, 844 a.a., surface antigen (RefSeq) from Shewanella amazonensis SB2B

 Score =  502 bits (1292), Expect = e-146
 Identities = 286/828 (34%), Positives = 456/828 (55%), Gaps = 74/828 (8%)

Query: 9   LSMLAASVLTVCA-----GQAHAVEPFVIKDIRVEGVQRVEPGTVFGYLPVKVGETFTDD 63
           L+ L AS++ + A     G A    PF + DI+VEG+QRV  G     LP+KVG+T    
Sbjct: 20  LNKLFASMMLLGASYSGTGLAETFAPFTVTDIQVEGLQRVALGAALLSLPIKVGDTVDQL 79

Query: 64  KGAESIRALYNTGFFKDVQIRAEGNVLVVRVEERPAISQLEFIGIKEFDKDTLRRSLRGV 123
           K  ++I++LY T  F  V +  +  VLVV V+ERP IS++ F G K+   + L+ SL   
Sbjct: 80  KLQQAIKSLYATTNFDTVSVANDDGVLVVTVKERPTISEVTFEGNKDIKDEQLQESLDNS 139

Query: 124 GVAEARYYDKSLIDRAEQELKRQYVSRGYYAADVQTTVTPVDANRVAVTFTVDEGPVAKI 183
           GV      D++++   E+ L+  Y   G Y A V+  V  +  NRV + F   EG  A+I
Sbjct: 140 GVKVGEALDRTMLSGIEKGLQDFYYGVGKYGAKVEAQVINLPRNRVELKFKFTEGLAAEI 199

Query: 184 RQINIVGNKAFSEGDLRDEMQLSTPNWLSWYTK--NDLYSKQKLTADLEALRSFYLDRGY 241
           RQINIVGN  FS+ +L   ++L   ++++W+       Y KQKL ADLE +++ Y + GY
Sbjct: 200 RQINIVGNSKFSDAELIGMLELK--DYVAWWDLFGERRYQKQKLQADLETIKTHYHNNGY 257

Query: 242 LEFAIESTQVSITPDKKDIYLTLNIHEGEQYKVSDIKLTGELLSKQAEMEKLIKLKQGDV 301
           + F + STQV++TPD+K +Y+T+N+ EGEQYKV ++ LTG+L+ ++  M  ++ +K GD 
Sbjct: 258 IRFDVTSTQVAMTPDRKGLYITINVDEGEQYKVKEVNLTGDLMGREELMRAILPIKAGDQ 317

Query: 302 FSSAKLSATTKAITDLLGTYGYAFATINPQPQIDQKSRTVALTLVVDPGRRVYVRRVNVV 361
           ++ A ++ T +     LG +GYA+  +   P+ID +++ V L + V PG+RVYVR VN  
Sbjct: 318 YNGADVTFTEEMYAKYLGRFGYAYPEVKTFPEIDDENKEVTLNVNVRPGKRVYVRSVNFT 377

Query: 362 GNSKTRDEVVRREMRQMESSWFDGEKLQLSQNRINRTGYFTDTNITTEDVPGTSDQVDVN 421
           GN+ T+DEV+RRE+RQME +W +   ++LS+NR+NR G+F   +  T  VPGT D VDV+
Sbjct: 378 GNTVTKDEVLRRELRQMEGAWLNSANVELSKNRLNRLGFFETVDTETVQVPGTDDLVDVS 437

Query: 422 VNVTEKPTGQISLGVGFSSTDKLVLSAGIRQDNVFGSGTSLGLDVNTSKSNRTIAVTQYD 481
             V E+P+G  + G+G+ +   + L  G++Q N  G+G   G+++NT+K ++ ++++  D
Sbjct: 438 FKVKEQPSGSFNAGIGYGTESGISLQFGVQQSNFLGTGNQAGININTNKYSKNVSLSYSD 497

Query: 482 PYFTVDGISRSTELYYRTYRPLYYTGDQDYRIVQQGGNIKFGVPFSETDTVFFGIGYERT 541
           PYFT DG+S    +Y+  +        + Y+    G  +  G P +E + + FG+G+   
Sbjct: 498 PYFTKDGVSLGGNIYWNEF-DANEANLERYKNSSYGVALSSGFPVNEYNRLNFGVGFRHN 556

Query: 542 TIDVTSNTPL------VYQNYVAKNGRIS-NNFPITIGWSKDQRDSALVPTRGRYQQANL 594
           TI   S          +Y++    N  +S NNF +  GW +   +    PT G  Q+ + 
Sbjct: 557 TISEISAYEQALRFYNIYRDEDDPNSDLSFNNFELNAGWYRSTLNRGTFPTDGSSQRLSG 616

Query: 595 EVGIPGGDLQYYRAYYQHQYFYPV--SKSFTLAFNNEVGYGHGYG---GKD--FPVFKNY 647
           ++  PG DLQY++      +++P+  S SF L     +GYG+GYG   G D   P ++NY
Sbjct: 617 KMSTPGSDLQYFKTDLDTNFYFPLTRSHSFVLLSRARIGYGNGYGDFNGNDQILPFWENY 676

Query: 648 YAGGIGSVRGYETSTLGPRD------------------------------ANGVAVGGAS 677
           Y+GG  S+RG++++++GPR                               + G ++GG +
Sbjct: 677 YSGGSSSLRGFKSNSVGPRSFYVVRGSEPCSPDPSGDGCGLPGDPNQIQVSQGRSIGGNA 736

Query: 678 KFVGNMEFIFPLP--GSGVDRTVRLFTFFDYGNV-----------------FAEGQPFK- 717
               ++E I P P        +VR   F D GNV                 FA+ + +  
Sbjct: 737 VATASVELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYDKYRSLPAEEFAKLEDYSD 796

Query: 718 VGDMRYSTGFGLSWLSPIGPLKISMGFPIKKKAEDQTQRFQFQIGTAF 765
              +R S G  + WLSP+GP+  S+ +PIK+  +D+T+ F F IG  F
Sbjct: 797 PSRLRASWGMSVQWLSPMGPMVFSLAWPIKEYEDDETEIFSFNIGKTF 844