Pairwise Alignments

Query, 117 a.a., transposase from Rahnella sp. WP5

Subject, 342 a.a., transposase IS116/IS110/IS902 family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 48.5 bits (114), Expect = 8e-11
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 1   VGLITASLLATKLGDGKSYASSRDFAASTGLVPRQYSTGGKSTLMGISKRGDKNLRRLLV 60
           +G + A      + D   + SS+      GL P +  +G +    GI+K GD NLRR L 
Sbjct: 221 IGAVVALTFRAAVDDPARFRSSKRIGPWVGLTPSRNQSGERDVSGGITKAGDVNLRRTLC 280

Query: 61  QCARAFMQRLEHNQGRLADWVK---AQLSRHHSNVVA-CGLANKLARIAWSVTTPRTAF 115
           Q A   M     N+GR + W++   AQL++     +A   LA ++A I   +    T F
Sbjct: 281 QAATVMM-----NRGR-STWLRTWGAQLAQRRGRKIAMVALARRIAVILHRIWVDGTTF 333