Pairwise Alignments

Query, 311 a.a., HTH-type transcriptional regulator MetR from Rahnella sp. WP5

Subject, 318 a.a., transcriptional regulator, LysR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  228 bits (580), Expect = 2e-64
 Identities = 121/290 (41%), Positives = 175/290 (60%), Gaps = 5/290 (1%)

Query: 2   IELKHLRTLQALRNTGSLAAAASQLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTPQ 61
           +E +HLRT++A+   G LA AA QL+ TQSALSHQ   LE + G  LFVR+S+PL+ +  
Sbjct: 11  LEFRHLRTVKAIHEAGGLAKAADQLNITQSALSHQIKGLEDQAGLELFVRRSKPLKLSAA 70

Query: 62  GEIMLNLAEQVLPQI---QQALQACNEPHQTSLRIAIECHSCIQWLTPALDNFHQNWPQV 118
           G  +L LAEQVLPQ+   ++  +         L IAIECH+C +WL P L+ F + WP V
Sbjct: 71  GMRLLRLAEQVLPQVAALEEEFRGIKAGKTGRLHIAIECHACYEWLFPVLEQFRKAWPDV 130

Query: 119 LMDFKSGVTFDPQPSLQQGELDIVLTSDILPRSGLHYSPMFDFEVRLVLAPDHPLATKTV 178
            +D + G+ F   P+LQ+ E+D+V++SD     G+ ++P+FD+E   V +  HPLA K  
Sbjct: 131 DVDIRPGLQFQALPALQREEVDLVISSDPEELPGVDFTPLFDYEPVFVASAAHPLAAKPF 190

Query: 179 ITPEDLSTETLMIYPVQRQRLDIWRHFLQPAGVSP-SLKSVDNTLLLIQMVSARMGIAAL 237
           +  ED   E L+ YPV R RLD++   L PA + P +++ V+ T +++ +V++  G+A L
Sbjct: 191 VEAEDFRDELLITYPVDRARLDVFSELLIPARIEPRAVRQVELTAVILLLVASNRGVAVL 250

Query: 238 PHWVVESFERQGLVVTKTLGD-GLWSRLYAAVRDGEQRQPVTEAFIRSAR 286
           P WVV         VT+ L + G+  RLYAA RD E   P     IR AR
Sbjct: 251 PDWVVREVRYNSDYVTRPLTESGVTKRLYAATRDTETTLPFMSHVIRLAR 300