Pairwise Alignments

Query, 416 a.a., hypothetical protein from Rahnella sp. WP5

Subject, 297 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 37/242 (15%)

Query: 19  LILIFALVLFCYKAV---LFNTNVPIKTDVFGQFGDVIGGVVGSLWALAGVILFYLGLME 75
           LI + A V  C   +   +F+  V  K D FG FGD  GGV+  +   A V L    L  
Sbjct: 26  LIKLLAFVAGCLLILYFSIFHGGVGDKGD-FGAFGDYFGGVLNPILGFATVSLLVWSLKY 84

Query: 76  QRKDIKTNQNALDKQIQALENQNKEIELQRQEYEMARNIFAEQRDVLKEQSKTSRIQQFD 135
           Q  ++     AL +Q  AL  Q  E+   ++E  ++R     Q D L +++K + + +  
Sbjct: 85  QMDEL-----ALSRQELALTRQ--ELAETKEETALSRKAMEAQVDHLHKEAKLNELLRLM 137

Query: 136 STFYSLLDVYIKIRNDIFFSEDKIIDLINTEMCAID-YSSLLVRDKIKKTNEKYQEVYIS 194
           +T  +  D  +  + +    +D  +  IN++  A   Y++ L                  
Sbjct: 138 ATMKTKCDNMLNCKVN---EDDITLGGINSDRGAFSTYANSL------------------ 176

Query: 195 NKSTISHYLKTIYRLYKIIDEQSELTEKSKYSYSKIIRSQFTENELYLIYYN--AHSLYG 252
           N+ T +H L  +Y   K  +  ++L EK +  Y +   S + E E  L  Y   A + Y 
Sbjct: 177 NEMTYAHVL-NVYMPTKDKNMFNQLAEKFRLQY-EAPNSSWQELEALLCLYTQLALTYYD 234

Query: 253 VN 254
           +N
Sbjct: 235 IN 236