Pairwise Alignments

Query, 165 a.a., GAF domain-containing protein from Rahnella sp. WP5

Subject, 156 a.a., GAF domain-containing protein, involved in signal transduction (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  136 bits (343), Expect = 1e-37
 Identities = 75/142 (52%), Positives = 88/142 (61%), Gaps = 1/142 (0%)

Query: 2   NKEAFYTELKRDLNALIAGENNFIATLSNASALLFERLDGVNWVGFYLLDGTTLVLGPFQ 61
           NKE  Y EL   L AL++ E N IA L+N +A L +      WVGFYL++G  LVL PFQ
Sbjct: 11  NKEEKYRELLPQLQALVSSETNRIANLANIAAALKQTFHFF-WVGFYLVEGNELVLAPFQ 69

Query: 62  GKIACVRIPVGKGVCGTAVAENAVQRVGDVHAFPGHIACDAASNAEIVLPVTVNGTVIGV 121
           G IAC RI  G+GVCGTA  E     V DV  FPGHIAC + S +EIV+P+   G VIGV
Sbjct: 70  GPIACTRIRFGRGVCGTAWKEAQTLIVPDVEQFPGHIACSSDSKSEIVVPIIKEGNVIGV 129

Query: 122 LDIDSTVYQRFDEADELGLTEL 143
           LDIDS     FDE D   L E+
Sbjct: 130 LDIDSDTPDSFDETDARYLEEI 151