Pairwise Alignments

Query, 174 a.a., 23S rRNA accumulation protein YceD from Rahnella sp. WP5

Subject, 174 a.a., 23S rRNA accumulation protein YceD from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (426), Expect = 4e-47
 Identities = 80/174 (45%), Positives = 116/174 (66%), Gaps = 2/174 (1%)

Query: 1   MQKVKLPLTLDAVRTAQKRLDYTGVYTADQVTRVAQSVVSVDSDIQTSLSFNIDNQRLAV 60
           MQKVK+P T+D  + AQKRLD+ G+   +   R+ +SV  V  D + SLSF ID Q+L V
Sbjct: 1   MQKVKIPRTVDPAKAAQKRLDFDGIIQVNLFKRLEESVAGVKRDAEVSLSFEIDEQQLVV 60

Query: 61  ITGHSDVAVTLECQRCGKTFEHQVHTTYCFSPVQNDEQAEALPEAYEPIEVDDFGEVDLL 120
           I+G +++ V LECQRC + F H+    + ++P    +  E  P+ Y+ +++++FGEVDL+
Sbjct: 61  ISGKANIEVDLECQRCNEVFAHECEVEFTYTPYLGRKSEEDAPDEYDLVDLNEFGEVDLV 120

Query: 121 AMIEDEIILSLPVVPVHESEHCEVSEADMVFGKLPEEA--EKPNPFAVLASLKK 172
            ++EDE IL+LP V +H+   C V   ++VFG+LPEE   EKPNPF VL SLKK
Sbjct: 121 QLVEDEFILNLPQVAMHDEADCSVDSDNLVFGELPEEVLEEKPNPFDVLKSLKK 174