Pairwise Alignments

Query, 347 a.a., AI-2E family transporter from Rahnella sp. WP5

Subject, 389 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  297 bits (761), Expect = 3e-85
 Identities = 151/325 (46%), Positives = 223/325 (68%)

Query: 16  MMAMLVVIFAGIKSAADIIVPFILALFLAFVLNPLIVLLEKWRVPRALAVLLVATLVICM 75
           +MA +VVI AGIK+A+ I+VPF+L+ F+A + NP I  + + ++PRALAV ++   ++ M
Sbjct: 16  IMAFIVVILAGIKAASPIVVPFVLSAFIAVICNPAINGMTRLKLPRALAVAIMMVFIVLM 75

Query: 76  MVFLTTKLLVTLNEFARTLPQYRGLIVDKLSDIEAWFPQSELTLSPEQLASYIDPAATLN 135
            ++L + +  ++NEF+R LP YR  +V++ S +        + +S EQ+ +Y DP   L+
Sbjct: 76  GLWLASLVGSSINEFSRQLPLYRDQLVEQFSWVLTKLQALNIEVSKEQILAYFDPGIALS 135

Query: 136 MVSKLISYLSNAMAGLFLLLMTVAFMLLEVPQLPYKVEQMSEDPGKGMANIQRALDSVTR 195
           M + ++S +   MA LFL+++TV FML E   LP K+    +DP   +  I + L SV +
Sbjct: 136 MTTNMLSSVGGVMANLFLIILTVVFMLFEAQDLPKKLHFALDDPDMRIKQIDKFLQSVNQ 195

Query: 196 YLVIKTLISVVTGLAVWALLAVTGIRFAFLWGMLAFALNYIPNIGSFIAAIPPIIQAFLF 255
           Y+VIKTL+SV TG+ V   LA+ G+ +A LW ++AF  NYIPNIGS IAAIPP++ AF+ 
Sbjct: 196 YMVIKTLVSVGTGVVVGTGLALMGVDYALLWAVVAFLFNYIPNIGSIIAAIPPVLLAFIQ 255

Query: 256 NGFSEGLILAGGYILINLIFGSIIDPKILGRGLGLSTLVVFMSLIFWGWLMGPVGMLLSV 315
            G +     A  Y+  N + G+I++PK +GRGLGLSTLVVF+SLIFWGWL+G VGMLLSV
Sbjct: 256 LGPAGAGGTALLYLATNTVMGNIVEPKYMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSV 315

Query: 316 PLTIVLKIALEPTAAGHKIAVLLGD 340
           PLT+++KIALE + +G  +A+LL D
Sbjct: 316 PLTMIVKIALESSQSGGWLAILLAD 340