Pairwise Alignments

Query, 668 a.a., excinuclease ABC subunit B from Rahnella sp. WP5

Subject, 671 a.a., excinuclease ABC, B subunit from Pseudomonas stutzeri RCH2

 Score =  943 bits (2437), Expect = 0.0
 Identities = 481/673 (71%), Positives = 563/673 (83%), Gaps = 8/673 (1%)

Query: 1   MSKEFKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT 60
           MSK F+L + FKP+GDQPEAIR++ EG+E GL+HQTLLGVTGSGKTF++ANVIA + RPT
Sbjct: 1   MSK-FELVTRFKPAGDQPEAIRQMIEGIEAGLSHQTLLGVTGSGKTFSIANVIAHVQRPT 59

Query: 61  MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120
           +VLAPNKTLAAQLYGE K FFP NAVEYFVSYYDYYQPEAYVPSSDTFIEKDAS+N+HIE
Sbjct: 60  LVLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE 119

Query: 121 QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ 180
           QMRLSATKALLER D I+V +VS IYGLGDP  YLKM+LH+ +G  +DQR +LRRL  LQ
Sbjct: 120 QMRLSATKALLERPDAIIVTTVSCIYGLGDPQSYLKMVLHVDRGDRLDQRELLRRLTGLQ 179

Query: 181 YARNDQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPR 240
           Y RND  F R+TFRVRG+VID+FPAESD  A+RIELFD EVE LS FDPLTG+V  ++PR
Sbjct: 180 YTRNDMDFARATFRVRGDVIDIFPAESDLEAVRIELFDDEVESLSAFDPLTGEVIRKLPR 239

Query: 241 FTIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNEL 300
           FT YPK+HYVTPRE ++ A+E+IK EL +R   L + NKL+E QR+ QRT+FDLEM+ EL
Sbjct: 240 FTFYPKSHYVTPRETLLDAIEKIKDELRERLDYLRSQNKLVEAQRLEQRTRFDLEMIMEL 299

Query: 301 GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKET 360
           GYC+GIENYSRYLSGR  GEPPPTLFDYLPAD LL++DESHV++PQ+G MYKGDRSRKET
Sbjct: 300 GYCNGIENYSRYLSGRDAGEPPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKET 359

Query: 361 LVEYGFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLD 420
           LVEYGFRLPSALDNRPMRF+E+EA+ PQ+I+VSATPG YE E +G  VV+QVVRPTGL+D
Sbjct: 360 LVEYGFRLPSALDNRPMRFDEWEAICPQTIFVSATPGPYEAEHAG-RVVEQVVRPTGLVD 418

Query: 421 PIIEVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI 480
           P IEVRP  TQVDDLLSEIRK V   ERVLVTTLTKRMAEDLT+YL +H  +VRYLHSDI
Sbjct: 419 PQIEVRPALTQVDDLLSEIRKCVVKEERVLVTTLTKRMAEDLTDYLSDHDVRVRYLHSDI 478

Query: 481 DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540
           DTVERVEIIRDLRLG FDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
Sbjct: 479 DTVERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 538

Query: 541 RAARNLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQ-L 599
           RAARNLNG+AILY D +T SM RA++ETERRR KQ A+N  NGI P G+ K + DIL+  
Sbjct: 539 RAARNLNGRAILYADNVTGSMQRAMDETERRRNKQIAFNEANGIVPKGVTKDVRDILEGA 598

Query: 600 GQPKTKKNKDKRDAEAAQTF-----KSLTPKALEQRIKELESKMYAHAQNLEFEEAANTR 654
             P ++  K + +A+AA+       +  +P  + +RI++LE KM + A++LEFE AA  R
Sbjct: 599 TVPGSRSKKRRGEAKAAEESARYENELRSPSEITKRIRQLEEKMLSLARDLEFEAAAEAR 658

Query: 655 DELHALREQFIAI 667
           DE+H LRE+ + +
Sbjct: 659 DEIHKLRERLLQV 671