Pairwise Alignments

Query, 668 a.a., excinuclease ABC subunit B from Rahnella sp. WP5

Subject, 671 a.a., UvrABC system protein B from Enterobacter sp. TBS_079

 Score = 1149 bits (2973), Expect = 0.0
 Identities = 587/671 (87%), Positives = 624/671 (92%), Gaps = 3/671 (0%)

Query: 1   MSKEFKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT 60
           MSK FKL+S F+PSGDQPEAIRRLEEGLE+GLAHQTLLGVTGSGKTFT+ANVIADL RPT
Sbjct: 1   MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT 60

Query: 61  MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120
           MVLAPNKTLAAQLYGEMKEFFP+NAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
Sbjct: 61  MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120

Query: 121 QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ 180
           QMRLSATKALLERRDV+VVASVSAIYGLGDPDLYLKMMLHLT+GMIIDQR+ILRRL ELQ
Sbjct: 121 QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMIIDQRAILRRLTELQ 180

Query: 181 YARNDQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPR 240
           Y RNDQAFQR TFRVRGEVID+FPAESDD+ALR+ELFD+EVERLSLFDPLTG V+  V R
Sbjct: 181 YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGHVESVVQR 240

Query: 241 FTIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNEL 300
           +TIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQR+SQRTQFDLEMMNEL
Sbjct: 241 YTIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL 300

Query: 301 GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKET 360
           GYCSGIENYSR+LSGRGPGEPPPTLFDYLPADGLL++DESHVTIPQIGGMY+GDR+RKET
Sbjct: 301 GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET 360

Query: 361 LVEYGFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLD 420
           LVEYGFRLPSALDNRPM+FEEFEALAPQ+IYVSATPG YELEKSGD+VVDQVVRPTGLLD
Sbjct: 361 LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLLD 420

Query: 421 PIIEVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI 480
           PIIEVRPV TQVDDLLSEIR R AINERVLVTTLTKRMAEDLTEYLEEHGE+VRYLHSDI
Sbjct: 421 PIIEVRPVATQVDDLLSEIRIRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI 480

Query: 481 DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540
           DTVER+EIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
Sbjct: 481 DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540

Query: 541 RAARNLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQLG 600
           RAARN+NGKAILYGDKIT SMA+AI ETERRR KQ+ YN E+GITP GLNKK+ DIL LG
Sbjct: 541 RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG 600

Query: 601 Q--PKTK-KNKDKRDAEAAQTFKSLTPKALEQRIKELESKMYAHAQNLEFEEAANTRDEL 657
           Q   KTK K + K  +        LTPKAL+Q+I ELE +M  HAQNLEFEEAA  RD+L
Sbjct: 601 QNIAKTKAKGRGKARSVVEPDTVELTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL 660

Query: 658 HALREQFIAIS 668
           H LR+ FIA S
Sbjct: 661 HQLRDLFIAAS 671