Pairwise Alignments

Query, 238 a.a., succinate dehydrogenase iron-sulfur subunit from Rahnella sp. WP5

Subject, 235 a.a., succinate dehydrogenase iron-sulfur subunit (RefSeq) from Shewanella amazonensis SB2B

 Score =  394 bits (1011), Expect = e-114
 Identities = 184/236 (77%), Positives = 208/236 (88%), Gaps = 3/236 (1%)

Query: 1   MKIEFSIYRYNPDVDDVPYMKDYVLEAKEGRDMMLLDALILLKEQDPTLAFRRSCREGVC 60
           MK+EFS+YRYNPDVD  P M+DY  +  +G DMM+LDAL+ LKE DPTL+FRRSCREGVC
Sbjct: 1   MKLEFSVYRYNPDVDTKPRMQDYSFDVPDGSDMMVLDALLKLKEIDPTLSFRRSCREGVC 60

Query: 61  GSDGVNMNGKNGLACITPVSTLRNGSKKIVIRPLPGLPVVRDLVVDMGQFYKQYEKIKPY 120
           GSDG+NMNGKNGLACITP+ST +   KKI IRPLPG+PVVRDLVVD+ QFYKQYEKIKPY
Sbjct: 61  GSDGMNMNGKNGLACITPISTFKG--KKIEIRPLPGMPVVRDLVVDLSQFYKQYEKIKPY 118

Query: 121 LLNDGKNPPAREHLQMPDDREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYR 180
           L+ND K P AREHLQ P++R  LDGLYECI+CACCST+CPSFWWNPDKFVGP+GLL AYR
Sbjct: 119 LINDEKKP-AREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFVGPSGLLHAYR 177

Query: 181 FLIDSRDTETQSRLDDLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQR 236
           FLIDSRDT T+ RL +L+DA+SVFRCH IMNCV VCPKGLNPTKAIGHIKSMLL+R
Sbjct: 178 FLIDSRDTATEERLAELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKR 233