Pairwise Alignments

Query, 238 a.a., succinate dehydrogenase iron-sulfur subunit from Rahnella sp. WP5

Subject, 235 a.a., succinate dehydrogenase, iron-sulfur protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  398 bits (1022), Expect = e-116
 Identities = 185/236 (78%), Positives = 209/236 (88%), Gaps = 3/236 (1%)

Query: 1   MKIEFSIYRYNPDVDDVPYMKDYVLEAKEGRDMMLLDALILLKEQDPTLAFRRSCREGVC 60
           MK+EF++YRYNPDVD  PYM+DY LE  +G DMM+LDALI LKE+DPTL FRRSCREGVC
Sbjct: 1   MKLEFAVYRYNPDVDTKPYMQDYSLEVADGTDMMVLDALIKLKEKDPTLVFRRSCREGVC 60

Query: 61  GSDGVNMNGKNGLACITPVSTLRNGSKKIVIRPLPGLPVVRDLVVDMGQFYKQYEKIKPY 120
           GSDG+NMNGKNGLACITPVST +   KK+ IRPLPG+PVVRDLVVD+ QFYKQYEKIKP+
Sbjct: 61  GSDGLNMNGKNGLACITPVSTFKG--KKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPF 118

Query: 121 LLNDGKNPPAREHLQMPDDREKLDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLAAYR 180
           L+ND K P AREHLQ P+ R  LDGLYECI+CACCST+CPSFWWNPDKF+GP+GLL AYR
Sbjct: 119 LINDDKQP-AREHLQSPEQRAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYR 177

Query: 181 FLIDSRDTETQSRLDDLNDAFSVFRCHSIMNCVSVCPKGLNPTKAIGHIKSMLLQR 236
           FLIDSRDT T+ RL +L+DA+SVFRCH IMNCV VCPKGLNPTKAIGHIKSMLL+R
Sbjct: 178 FLIDSRDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKR 233