Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Rahnella sp. WP5

Subject, 598 a.a., succinate dehydrogenase flavoprotein subunit from Rhodanobacter denitrificans FW104-10B01

 Score =  613 bits (1582), Expect = e-180
 Identities = 316/588 (53%), Positives = 395/588 (67%), Gaps = 7/588 (1%)

Query: 7   EFDAVVIGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNTHEDDWE 66
           ++D V++GAGGAG+R AL ++  GLS A ++KVFPTRSHTV+AQGGI  ALGN  EDDW 
Sbjct: 12  QYDVVIVGAGGAGLRVALGLAAAGLSVACVTKVFPTRSHTVAAQGGIAAALGNMGEDDWR 71

Query: 67  WHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLEDGRIYQRPFGGQSKNF 126
           +H YDTVKG D++GDQDAIEYMC+    A++ELEH G+PFSR EDG IYQRPFGG +   
Sbjct: 72  YHFYDTVKGGDWLGDQDAIEYMCREAIPAVIELEHFGVPFSRTEDGHIYQRPFGGHTVRH 131

Query: 127 GGEQAARTAAAADRTGHALLHTLYQQNLKKGTTIFSEWYSLDLVKN-QDGAIVGCTAICI 185
           G   A R+ AAADRTGHA+LHTLY Q LK     F E++  DLV + + G + G  AI +
Sbjct: 132 GEALAQRSCAAADRTGHAILHTLYTQALKHKVKFFVEYFVTDLVTDPRTGDVAGALAINL 191

Query: 186 ETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQFHPTG 245
             G V +F+  A +LATGG GR Y S+T+AH  TGDG GMALRAGV +QD+E  QFHPTG
Sbjct: 192 TEGSVHFFRGHAVILATGGYGRTYFSSTSAHTCTGDGGGMALRAGVALQDLEFVQFHPTG 251

Query: 246 IAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCEG 305
           I G+G L+TEG RGEGGYL N DGERFMERYAP+ KDLA RDVV+R+I +EIREGRG  G
Sbjct: 252 IYGSGCLITEGVRGEGGYLTNADGERFMERYAPHVKDLASRDVVSRAITVEIREGRGV-G 310

Query: 306 PWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVT 365
               H  L L HLG D L  RLPGI E +R FA VD  KEPIPV+PT HY MGGIPT + 
Sbjct: 311 EHKDHVLLNLAHLGSDTLHERLPGISETARIFAGVDVTKEPIPVLPTAHYCMGGIPTNMY 370

Query: 366 GQALRVNAQGQDEVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQESITE 425
           GQ ++      D ++PGLFA+GE ACVSVHGANRLG NSLLDL+VFGRAA     E I  
Sbjct: 371 GQVVQKVGSDNDHIMPGLFAIGEAACVSVHGANRLGTNSLLDLIVFGRAAAQRCAELIKP 430

Query: 426 QGESRDASQDDIDVSLERLNRWNNTRSGEDPVAIRKDLQSCMQNNFSVFREGDAMAKGLE 485
                    D +D +L RL++  + + G     +R+ +Q  MQN+ +VFR  + + +G E
Sbjct: 431 NTPFAGLPTDALDPALARLDKVRHAKGGTPTAQLREKMQRTMQNDAAVFRTAETLQQGCE 490

Query: 486 ELKVIRERLKSARLDDTSSEFNTQRVECLELDNLMETAFSTAVSANYRTESRGAHSRFDF 545
            +  I  + +   + D S  +N+  +E  ELDNL+  A  T  SA  R E+RGAH+R DF
Sbjct: 491 RIDAIYAQFEDVHVSDPSLIWNSDLIESFELDNLLVQAVGTMHSAAARPETRGAHARDDF 550

Query: 546 PERDDANWLCHTLYQPETE---SMTRREVNMQP--KLRAAFPPKARTY 588
           PERDD NW+ HTL + + +   ++  R V+MQP        PP  R Y
Sbjct: 551 PERDDVNWMKHTLVKVDDKGRCTLDYRPVHMQPLDDEVETIPPAKRVY 598