Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit from Rahnella sp. WP5

Subject, 588 a.a., succinate dehydrogenase, flavoprotein subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  971 bits (2510), Expect = 0.0
 Identities = 469/588 (79%), Positives = 521/588 (88%)

Query: 1   MNLPVREFDAVVIGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNT 60
           M++PVREFDAVVIGAGGAGMRAALQIS+ G SCAL+SKVFPTRSHTVSAQGGITVALGN 
Sbjct: 1   MSIPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA 60

Query: 61  HEDDWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLEDGRIYQRPFG 120
           HED WE HMYDTVKGSD+IGDQDAIE+MC+TGPEAI+ELEHMGLPFSR ++G+IYQRPFG
Sbjct: 61  HEDHWEQHMYDTVKGSDFIGDQDAIEFMCQTGPEAIIELEHMGLPFSRFDNGKIYQRPFG 120

Query: 121 GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKKGTTIFSEWYSLDLVKNQDGAIVGC 180
           GQSKNFGGEQAARTAAAADRTGHALLH LYQQN+K  T +FSEWY+LDLVKNQDGAIVGC
Sbjct: 121 GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKHKTQVFSEWYALDLVKNQDGAIVGC 180

Query: 181 TAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ 240
           TAI IETGE+VYFKAKATVLATGGAGRIY STTNAHINTGDGVGMA+RAGV +QDMEMWQ
Sbjct: 181 TAIEIETGEIVYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQ 240

Query: 241 FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSIMIEIREG 300
           FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLA RDVVARS+M EIREG
Sbjct: 241 FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG 300

Query: 301 RGCEGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI 360
           RG +GP GPH  LKLDHLGK+ LE+RLPG+ ELSRTFAH+DP   PIPV+PTCHYMMGG+
Sbjct: 301 RGLDGPLGPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGL 360

Query: 361 PTKVTGQALRVNAQGQDEVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQ 420
           PTKV+GQ +R N  G ++ + GLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAG HL 
Sbjct: 361 PTKVSGQVIRKNTDGTEQDVVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG 420

Query: 421 ESITEQGESRDASQDDIDVSLERLNRWNNTRSGEDPVAIRKDLQSCMQNNFSVFREGDAM 480
           +++ E  + +DA+  DI  SL RL RW + + GEDPV IRKDLQ CMQ NFSVFR GDAM
Sbjct: 421 KALDETADPKDATDADIQASLARLQRWESNKDGEDPVQIRKDLQLCMQLNFSVFRRGDAM 480

Query: 481 AKGLEELKVIRERLKSARLDDTSSEFNTQRVECLELDNLMETAFSTAVSANYRTESRGAH 540
           A+GLE+LK IR+RL++A+L D S EFNTQR+ECLELDNLM TA +TA +AN+RTESRGAH
Sbjct: 481 AEGLEQLKAIRKRLENAKLSDNSREFNTQRIECLELDNLMATAIATAYAANFRTESRGAH 540

Query: 541 SRFDFPERDDANWLCHTLYQPETESMTRREVNMQPKLRAAFPPKARTY 588
           SR D+ ERDD NWLCH+L+ P TE+M RR VNM PKLR AFPPK RTY
Sbjct: 541 SREDYLERDDENWLCHSLFDPVTETMDRRAVNMAPKLREAFPPKKRTY 588