Pairwise Alignments

Query, 264 a.a., endonuclease VIII from Rahnella sp. WP5

Subject, 287 a.a., formamidopyrimidine-DNA glycosylase from Caulobacter crescentus NA1000

 Score = 77.4 bits (189), Expect = 3e-19
 Identities = 79/292 (27%), Positives = 115/292 (39%), Gaps = 33/292 (11%)

Query: 1   MPEGPEIRRAADVLATAVVNKPLTDVW-----FAFPALKPYQSALRGTRITSIETRGKAL 55
           MPE PE+      L   +    L+ V        FP    +   L G RI  ++ R K +
Sbjct: 1   MPELPEVETVRRGLEPVLSGARLSSVRANRPDLRFPLPDGFVQRLTGARILRLDRRAKYI 60

Query: 56  LTHFSNGLTLYSHNQLYGVWRV------VNAGEVAKET---KRSLRVKLETTEAAILLYS 106
           L     G TL  H  + G + +      V  G+ A+E     +   V  +T + A + Y 
Sbjct: 61  LAPLDRGDTLVMHLGMTGRFEIAAPEGTVRPGDFAREVTPDDKHAHVVFQTEDGATVTYF 120

Query: 107 ASE----ISIYDTAEIEKHPFLQRIGPDVLDERLTVAQVRERLLSPKFCNRQLG--GMLL 160
                  + +  T  +  H +   +GP+ L E         R L   F NR+ G   +LL
Sbjct: 121 DPRRFGFMDLIPTDRVSHHAWFAAMGPEPLGEGFDA-----RTLEKAFANRKQGPKTLLL 175

Query: 161 DQAFLAGLGNYLRAEILWLAKLLPDHKPKELNDTERDALADACLSVARLSYATRGT--MD 218
           DQ  +AGLGN    E L  + + P      +       L  A   V   +    G+   D
Sbjct: 176 DQRTVAGLGNIYVCEALHRSGISPFKPSGNIAKKRLTPLTAAIKDVLAEAVEVGGSTLKD 235

Query: 219 ENVHHGAL----FRFKVFGRTGQPC--ERCGDPIMKTSVSSRPFFWCPVCQV 264
                GAL     RF+V+ R G+PC    C   I +   + R  F+CPVCQV
Sbjct: 236 FAAADGALGYFQHRFRVYDREGEPCPTPACKGVIAREVQAGRSTFFCPVCQV 287