Pairwise Alignments

Query, 304 a.a., recombination-associated protein RdgC from Rahnella sp. WP5

Subject, 303 a.a., recombination associated protein (RefSeq) from Shewanella loihica PV-4

 Score =  298 bits (762), Expect = 1e-85
 Identities = 153/299 (51%), Positives = 209/299 (69%), Gaps = 1/299 (0%)

Query: 2   LWFKNLLVYRLSREVSLSADEMEKQLSAFTFTPCGSQDMSKTGWVSPMGSHGGDALTHVN 61
           +WFKNL VYR ++  S+  + +EK L  FTF+PC SQD+SK G+   +G  G   L H  
Sbjct: 1   MWFKNLTVYRFNKPFSVDTEALEKSLEDFTFSPCSSQDISKFGFSKALGKLG-HTLVHSA 59

Query: 62  GGQILICARKEEKILPSPVIKQELQAKIEQLEGEQHRKLKKTEKDSLKDEVLHSLMPRAF 121
             + LICA KEEKILPS V+K+ L+ K+ Q+E E++RKL K EKD+LK+E+  +L+PRAF
Sbjct: 60  ENRHLICATKEEKILPSQVVKEALEEKVAQIEAEENRKLAKKEKDALKEEITTTLLPRAF 119

Query: 122 SRFSQTFMWIDTVNGLIMVDAASAKKAEDMLALLRKSLGSLPVVPLTMESPIELTLTEWV 181
           SR SQ    I     +I+VD++SA KAE++LALLRK+LGSLPV+P++ ++PIE  LTEW+
Sbjct: 120 SRRSQIHALILPEIEMILVDSSSATKAEELLALLRKALGSLPVIPMSFKTPIEAQLTEWL 179

Query: 182 RSGDTPAGFTLQDEAELKAILEEGGVIRCKKQVLVSDEIATHIENGKLVTKLAVDWQERI 241
           +S   PA F +QDEAELK+  +EGG++R K+Q L  +E+  H+E GK V KLA+ + + I
Sbjct: 180 KSNSAPAPFEMQDEAELKSDSDEGGIVRFKQQDLTENEVLAHLEVGKQVHKLALHFGQSI 239

Query: 242 AVVLADDGSIKRLKFSDIIRDQNEDIDREDFAGRFDADFVLMTGELAALIQNLIEALGG 300
           A VL  D  IKRLKFS+  R  N+++  ED   R DADF LM  EL AL+ +L+E LGG
Sbjct: 240 AFVLQSDAGIKRLKFSEEFRAHNDEVSTEDPLARLDADFALMGSELIALMNSLVEVLGG 298