Pairwise Alignments

Query, 304 a.a., recombination-associated protein RdgC from Rahnella sp. WP5

Subject, 299 a.a., recombinase RdgC from Cupriavidus basilensis FW507-4G11

 Score =  213 bits (543), Expect = 3e-60
 Identities = 118/300 (39%), Positives = 181/300 (60%), Gaps = 4/300 (1%)

Query: 2   LWFKNLLVYRLSREVSLSADEMEKQLSAFTFTPCGSQDMSKTGWVSPMGSHGGDALTHVN 61
           +WFKNL ++RLS   SL+A+E+E+ L+   F P  S +M   GW SP  +    AL H  
Sbjct: 1   MWFKNLQLHRLSAPWSLAAEEVEECLARHAFFPGTSLEMQTQGWASPRDN---GALVHQV 57

Query: 62  GGQILICARKEEKILPSPVIKQELQAKIEQLEGEQHRKLKKTEKDSLKDEVLHSLMPRAF 121
           G Q+L+  R E+K+LPS V+ Q  +A+  +LE +Q  K  + +   LK++V   L+PRAF
Sbjct: 58  GKQLLLTMRTEKKLLPSTVVNQVTKARAVELEEQQGFKPGRKQMRELKEQVTEELLPRAF 117

Query: 122 SRFSQTFMWIDTVNGLIMVDAASAKKAEDMLALLRKSLGSLPVVPLTMESPIELTLTEWV 181
           S    T +WID VNG + +DAA+  KA+++  LL K++  LP+  L +       +T+W+
Sbjct: 118 SIRRDTRVWIDPVNGWLAIDAAAPAKADEVRGLLFKAIDPLPLDNLHVNQSPVTAMTDWL 177

Query: 182 RSGDTPAGFTLQDEAELKAILEEGGVIRCKKQVLVSDEIATHIENGKLVTKLAVDWQERI 241
            +   PAGFTL  E EL++  E    +R  +  L ++++  HI  GK  T+LA+ W +R+
Sbjct: 178 ATDTAPAGFTLDQEMELQSSAESKATVRYVRHPLDAEDLRRHIAAGKRCTRLAMTWNDRV 237

Query: 242 AVVLADDGSIKRLKFSDIIRDQNEDIDREDFAGRFDADFVLMTGELAALIQNLIEALGGE 301
           + VL +  +IKR+   D+I++Q +   R+D   RFD DF +M GELA L+ +L  ALGGE
Sbjct: 238 SFVLTESLTIKRVAPLDVIKEQADPSARDD-EERFDGDFTMMAGELANLLSDLTAALGGE 296