Pairwise Alignments

Query, 301 a.a., N-acetylmuramic acid 6-phosphate etherase from Rahnella sp. WP5

Subject, 284 a.a., DNA-binding transcriptional regulator HexR (RefSeq) from Shewanella loihica PV-4

 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 7/120 (5%)

Query: 131 LNLKAQDTVVGLAASGRTPYVIGALRYATEMGCATVAISCNPDSPIAREASIAISPVVGP 190
           +N    D VV ++ +GRT  +I   R A E G A +AI+ + +SP++ E ++ ++  V P
Sbjct: 171 INSSEGDVVVLISHTGRTKSLIDIARLARENGAAVIAIT-SRNSPLSAECTLPVTMEV-P 228

Query: 191 EALTGSTRLKSGTAQKLVLNMISTGAMVKSGKVYQNLMVDVKATNVKLVDRACRIVVEAT 250
           E       + S  AQ +++++++TG  ++ G  ++  +       VK V +  RI  EAT
Sbjct: 229 EDTDMYLPMASRLAQLVIVDVLATGFTLRRGPRFRESL-----KRVKEVLKESRIDKEAT 283